RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 TMEM266Q2M3C6 531 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 CAVIN1Q6NZI2 390 aaKnown RBP18.49■□□□□ 0.55
HMGCL-209ENST00000513148 C7orf61Q8IZ16 206 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 USP28Q96RU2 1077 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 TRPC6Q9Y210 931 aa18.49■□□□□ 0.55
HMGCL-209ENST00000513148 TLE2Q04725 743 aa18.48■□□□□ 0.55
HMGCL-209ENST00000513148 NFRKBQ6P4R8 1299 aa18.48■□□□□ 0.55
HMGCL-209ENST00000513148 SLC43A3Q8NBI5 491 aa18.48■□□□□ 0.55
HMGCL-209ENST00000513148 RDM1Q8NG50 284 aa18.48■□□□□ 0.55
HMGCL-209ENST00000513148 TRMT13Q9NUP7 481 aaKnown RBP18.48■□□□□ 0.55
HMGCL-209ENST00000513148 PCDH10Q9P2E7 1040 aa18.48■□□□□ 0.55
HMGCL-209ENST00000513148 LAD1O00515 517 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 EVI5O60447 810 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 CDK7P50613 346 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 CYP4A11Q02928 519 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 PLPPR4Q7Z2D5 763 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 AFAP1L1Q8TED9 768 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 TRPV6Q9H1D0 765 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 CEP131Q9UPN4 1083 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 IGSF9BQ9UPX0 1349 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 B4GALT4O60513 344 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 MBD3O95983 291 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 PLCB4Q15147 1175 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 IL17AQ16552 155 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 C1orf53Q5VUE5 145 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
HMGCL-209ENST00000513148 DTHD1Q6ZMT9 781 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
HMGCL-209ENST00000513148 MAFBQ9Y5Q3 323 aaPredicted RBP18.47■□□□□ 0.55
HMGCL-209ENST00000513148 MROH7Q68CQ1 1323 aa18.47■□□□□ 0.55
HMGCL-209ENST00000513148 POTEB3A0JP26 581 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 VWA3AA6NCI4 1184 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 IGBP1P78318 339 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 ZNF200P98182 395 aaPredicted RBP18.46■□□□□ 0.55
HMGCL-209ENST00000513148 PRKCEQ02156 737 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 POTEBQ6S5H4 581 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 FAM126BQ8IXS8 530 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 ATP6V0A1Q93050 837 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 DYDC2Q96IM9 177 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 ZNF396Q96N95 335 aaPredicted RBP18.46■□□□□ 0.55
HMGCL-209ENST00000513148 PRDM5Q9NQX1 630 aaPredicted RBP18.46■□□□□ 0.55
HMGCL-209ENST00000513148 SETD4Q9NVD3 440 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 GTF2IRD1Q9UHL9 959 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 KAT6AQ92794 2004 aa18.46■□□□□ 0.55
HMGCL-209ENST00000513148 DCDC2CA8MYV0 355 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 ZNF862O60290 1169 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 BMP15O95972 392 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 ATP4AP20648 1035 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 MARCKSP29966 332 aaPredicted RBP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 PRPHP41219 470 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 CTTNQ14247 550 aaKnown RBP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 HIC1Q14526 733 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 EPHA7Q15375 998 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 ANKRD33Q7Z3H0 272 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 CHAMP1Q96JM3 812 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 EIF2AK1Q9BQI3 630 aaKnown RBP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 LXNQ9BS40 222 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 NOD1Q9Y239 953 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 TRIP12Q14669 1992 aaPredicted RBP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 PP2D1A8MPX8 630 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 SLC26A2P50443 739 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 FXR2P51116 673 aaKnown RBP eCLIP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 MLLT1Q03111 559 aaPredicted RBP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 DNM1Q05193 864 aaKnown RBP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 PPFIA1Q13136 1202 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 PTPAQ15257 358 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 UVSSAQ2YD98 709 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 TRAPPC12Q8WVT3 735 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 WRAP73Q9P2S5 460 aaPredicted RBP18.45■□□□□ 0.54
HMGCL-209ENST00000513148 LRWD1Q9UFC0 647 aa18.45■□□□□ 0.54
HMGCL-209ENST00000513148 C17orf102A2RUQ5 167 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 TLR3O15455 904 aaKnown RBP18.44■□□□□ 0.54
HMGCL-209ENST00000513148 P4HBP07237 508 aaKnown RBP18.44■□□□□ 0.54
HMGCL-209ENST00000513148 QARSP47897 775 aaKnown RBP18.44■□□□□ 0.54
HMGCL-209ENST00000513148 PSMC5P62195 406 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 PDE4CQ08493 712 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 FAAP100Q0VG06 881 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 GRIK4Q16099 956 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 PTGISQ16647 500 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 TPH2Q8IWU9 490 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 ATP8B4Q8TF62 1192 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 LMBR1Q8WVP7 490 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 RAB34Q9BZG1 259 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 TMEM150BA6NC51 233 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 OATP04181 439 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 CLTBP09497 229 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 INSRRP14616 1297 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 CDC25AP30304 524 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 ARL6IP4Q66PJ3 421 aaKnown RBP18.44■□□□□ 0.54
HMGCL-209ENST00000513148 SESTD1Q86VW0 696 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 ZBTB10Q96DT7 871 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 SEZ6LQ9BYH1 1024 aa18.44■□□□□ 0.54
HMGCL-209ENST00000513148 SEPT9Q9UHD8 586 aaPredicted RBP18.44■□□□□ 0.54
HMGCL-209ENST00000513148 CYP2C9P11712 490 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 SYN1P17600 705 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 GRIN1Q05586 938 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 PTPN11Q06124 597 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms