RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NARSO43776 548 aaKnown RBP10.64□□□□□ -0.71
NUP54-211ENST00000512151 ORC4O43929 436 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 RAB11FIP3O75154 756 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 EOMESO95936 686 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 HSPD1P10809 573 aaKnown RBP10.64□□□□□ -0.71
NUP54-211ENST00000512151 MTHFRP42898 656 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 ITIH3Q06033 890 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 SEMA3FQ13275 785 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 SPOUT1Q5T280 376 aaKnown RBP10.64□□□□□ -0.71
NUP54-211ENST00000512151 FAM102BQ5T8I3 360 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 UTP14CQ5TAP6 766 aaKnown RBP10.64□□□□□ -0.71
NUP54-211ENST00000512151 PDE12Q6L8Q7 609 aaKnown RBP10.64□□□□□ -0.71
NUP54-211ENST00000512151 VSIG10LQ86VR7 867 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 CASP10Q92851 521 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 GPR20Q99678 358 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 TCF25Q9BQ70 676 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 MAF1Q9H063 256 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 CWH43Q9H720 699 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 FBXL21Q9UKT6 434 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 DUSP12Q9UNI6 340 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 HCFC2Q9Y5Z7 792 aa10.64□□□□□ -0.71
NUP54-211ENST00000512151 DENND4AQ7Z401 1863 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 TBKBP1A7MCY6 615 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 MGEA5O60502 916 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 CFBP00751 764 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 FGRP09769 529 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 STAG3L1P0CL83 205 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 HSD17B4P51659 736 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 TDGQ13569 410 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 PGM5Q15124 567 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 QRICH1Q2TAL8 776 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 MARCH8Q5T0T0 291 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 CES5AQ6NT32 575 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 KCNV1Q6PIU1 500 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 MCF2L2Q86YR7 1114 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 MAML2Q8IZL2 1156 aaPredicted RBP10.63□□□□□ -0.71
NUP54-211ENST00000512151 MRPS27Q92552 414 aaKnown RBP10.63□□□□□ -0.71
NUP54-211ENST00000512151 CHAMP1Q96JM3 812 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 USP26Q9BXU7 913 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 ENTPD7Q9NQZ7 604 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 CYP26B1Q9NR63 512 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 TYW1Q9NV66 732 aaKnown RBP10.63□□□□□ -0.71
NUP54-211ENST00000512151 DLGAP2Q9P1A6 1054 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 PADI3Q9ULW8 664 aa10.63□□□□□ -0.71
NUP54-211ENST00000512151 MBLAC1A4D2B0 266 aaPredicted RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 CLASP2O75122 1294 aaKnown RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 DCNP07585 359 aaKnown RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 TGFB3P10600 412 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 HOXA13P31271 388 aaPredicted RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 MRPS6P82932 125 aaKnown RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 COL9A3Q14050 684 aaPredicted RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 ACAP1Q15027 740 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 KIAA1841Q6NSI8 718 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 TAF2Q6P1X5 1199 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 CYFIP1Q7L576 1253 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 ADGRF4Q8IZF3 695 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 PANK1Q8TE04 598 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 TCP11L1Q9NUJ3 509 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 ANAPC4Q9UJX5 808 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 DBR1Q9UK59 544 aaKnown RBP10.62□□□□□ -0.71
NUP54-211ENST00000512151 LZTS1Q9Y250 596 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 USTQ9Y2C2 406 aa10.62□□□□□ -0.71
NUP54-211ENST00000512151 NRCAMQ92823 1304 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 C2orf71A6NGG8 1288 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 NOP56O00567 594 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 CFHP08603 1231 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 TGM1P22735 817 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 PBX3P40426 434 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 SARSP49591 514 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 PLCB3Q01970 1234 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 GHRHRQ02643 423 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 RRP12Q5JTH9 1297 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 SPECC1Q5M775 1068 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 ZMYM1Q5SVZ6 1142 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 VPS53Q5VIR6 699 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 ZC3H14Q6PJT7 736 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 STOX1Q6ZVD7 989 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 FTHL17Q9BXU8 183 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 FAM49AQ9H0Q0 323 aaPredicted RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 TBC1D17Q9HA65 648 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 KCNK12Q9HB15 430 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 NGRNQ9NPE2 291 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 CDV3Q9UKY7 258 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 LRFN2Q9ULH4 789 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 MRPL11Q9Y3B7 192 aaKnown RBP10.61□□□□□ -0.71
NUP54-211ENST00000512151 MYH6P13533 1939 aa10.61□□□□□ -0.71
NUP54-211ENST00000512151 STK25O00506 426 aa10.6□□□□□ -0.71
NUP54-211ENST00000512151 PPP1R11O60927 126 aaPredicted RBP10.6□□□□□ -0.71
NUP54-211ENST00000512151 GLULP15104 373 aa10.6□□□□□ -0.71
NUP54-211ENST00000512151 SP4Q02446 784 aa10.6□□□□□ -0.71
NUP54-211ENST00000512151 TBC1D8BQ0IIM8 1120 aa10.6□□□□□ -0.71
NUP54-211ENST00000512151 TMEM62Q0P6H9 643 aa10.6□□□□□ -0.71
NUP54-211ENST00000512151 PPFIA1Q13136 1202 aa10.6□□□□□ -0.71
NUP54-211ENST00000512151 GRIK4Q16099 956 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms