RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 SYCE2Q6PIF2 218 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 SEPT1Q8WYJ6 367 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 ERAP1Q9NZ08 941 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 PKD2L1Q9P0L9 805 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 TRPV2Q9Y5S1 764 aa21.91■■□□□ 1.1
HMGCS1-206ENST00000511774 IGSF9BQ9UPX0 1349 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 FSCN2O14926 492 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 HDAC1Q13547 482 aaPredicted RBP21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 PLEKHM2Q8IWE5 1019 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 MICAL1Q8TDZ2 1067 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 RIPOR3Q96MK2 946 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 FTHL17Q9BXU8 183 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 SMOC2Q9H3U7 446 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 TAF6LQ9Y6J9 622 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 SQORQ9Y6N5 450 aa21.9■■□□□ 1.1
HMGCS1-206ENST00000511774 GALR2O43603 387 aaPredicted RBP21.89■■□□□ 1.09
HMGCS1-206ENST00000511774 STAG3L1P0CL83 205 aa21.89■■□□□ 1.09
HMGCS1-206ENST00000511774 APOBRQ0VD83 1088 aa21.89■■□□□ 1.09
HMGCS1-206ENST00000511774 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
HMGCS1-206ENST00000511774 GLG1Q92896 1179 aa21.89■■□□□ 1.09
HMGCS1-206ENST00000511774 DIAPH3Q9NSV4 1193 aa21.89■■□□□ 1.09
HMGCS1-206ENST00000511774 DMXL1Q9Y485 3027 aa21.89■■□□□ 1.09
HMGCS1-206ENST00000511774 PRR23AA6NEV1 266 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 FGF18O76093 207 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 TRAF1Q13077 416 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 PAK2Q13177 524 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 FAM102BQ5T8I3 360 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 ANKRD54Q6NXT1 300 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 XRRA1Q6P2D8 792 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 NLRX1Q86UT6 975 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 TMEM105Q8N8V8 129 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 SMARCC2Q8TAQ2 1214 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 GPRASP2Q96D09 838 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 NEK1Q96PY6 1258 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 EVPLQ92817 2033 aa21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 EP300Q09472 2414 aaPredicted RBP21.88■■□□□ 1.09
HMGCS1-206ENST00000511774 ARP10275 920 aa21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 IER5Q5VY09 327 aa21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 TMEM184AQ6ZMB5 413 aa21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 COLGALT1Q8NBJ5 622 aa21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 GIMAP8Q8ND71 665 aaPredicted RBP21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 CELF4Q9BZC1 486 aaKnown RBP21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 SMARCAD1Q9H4L7 1026 aa21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 CDHR5Q9HBB8 845 aa21.87■■□□□ 1.09
HMGCS1-206ENST00000511774 TBKBP1A7MCY6 615 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 PIK3CDO00329 1044 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 BRD1O95696 1058 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 TECP42680 631 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 SARSP49591 514 aaKnown RBP21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 FOXK2Q01167 660 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 UBE3AQ05086 875 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 PLPP4Q5VZY2 271 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 LLGL2Q6P1M3 1020 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 KREMEN2Q8NCW0 462 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 IRF2BPLQ9H1B7 796 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 CWH43Q9H720 699 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 ERVK-5Q9HDB9 667 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 TYW1Q9NV66 732 aaKnown RBP21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 TMEM260Q9NX78 707 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 LRFN2Q9ULH4 789 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 PCDHB12Q9Y5F1 795 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 PCDHA2Q9Y5H9 948 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 UBIAD1Q9Y5Z9 338 aa21.86■■□□□ 1.09
HMGCS1-206ENST00000511774 RRN3P2A6NIE6 340 aa21.85■■□□□ 1.09
HMGCS1-206ENST00000511774 HIDE1A8MVS5 230 aa21.85■■□□□ 1.09
HMGCS1-206ENST00000511774 IFIT3O14879 490 aaKnown RBP21.85■■□□□ 1.09
HMGCS1-206ENST00000511774 PLCB4Q15147 1175 aa21.85■■□□□ 1.09
HMGCS1-206ENST00000511774 TMEM40Q8WWA1 233 aa21.85■■□□□ 1.09
HMGCS1-206ENST00000511774 CDCA3Q99618 268 aaPredicted RBP21.85■■□□□ 1.09
HMGCS1-206ENST00000511774 OSBPL3Q9H4L5 887 aa21.85■■□□□ 1.09
HMGCS1-206ENST00000511774 KDM3AQ9Y4C1 1321 aa21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 DNAH14Q0VDD8 3507 aa21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 NBL1P41271 181 aa21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 SPOUT1Q5T280 376 aaKnown RBP21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 B4GALNT3Q6L9W6 998 aa21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 ZBTB33Q86T24 672 aa21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 TRPC6Q9Y210 931 aa21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 NOC2LQ9Y3T9 749 aaKnown RBP21.84■■□□□ 1.09
HMGCS1-206ENST00000511774 C2CD4DB7Z1M9 353 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 C9IYK1 514 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 FGFR1P11362 822 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 ANTXR2P58335 489 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 NFX1Q12986 1120 aaKnown RBP21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 UBE2SQ16763 222 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 THNSL1Q8IYQ7 743 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 RASGRP4Q8TDF6 673 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 ADAM2Q99965 735 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 MYL10Q9BUA6 226 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 PCDHB7Q9Y5E2 793 aa21.83■■□□□ 1.09
HMGCS1-206ENST00000511774 M0QZ92 97 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 CYP21A2P08686 494 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 NUBP1P53384 320 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 KRT76Q01546 638 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 MTMR1Q13613 665 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 MTHFD1LQ6UB35 978 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 SMC5Q8IY18 1101 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 FEZF2Q8TBJ5 459 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 CUL5Q93034 780 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 SPZ1Q9BXG8 430 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 POMKQ9H5K3 350 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms