RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 EML1O00423 815 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 ZNF862O60290 1169 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 DKC1O60832 514 aaKnown RBP eCLIP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 OATP04181 439 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 RPLP2P05387 115 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 P4HBP07237 508 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 HSP90AA1P07900 732 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 PFKMP08237 780 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 KLRC1P26715 233 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 THPOP40225 353 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 QARSP47897 775 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 TOB1P50616 345 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 EPHB4P54760 987 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 PSMC5P62195 406 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 PRKCEQ02156 737 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 BECN1Q14457 450 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 EPHA7Q15375 998 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 SHHQ15465 462 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 UGCGQ16739 394 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 TRIM71Q2Q1W2 868 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 RILPL1Q5EBL4 403 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 HABP4Q5JVS0 413 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 TMEM240Q5SV17 173 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 ZNF618Q5T7W0 954 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 NCAPH2Q6IBW4 605 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 TAF2Q6P1X5 1199 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 PSRC1Q6PGN9 363 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 LRRC8DQ7L1W4 858 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 TRMT1LQ7Z2T5 733 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 RPAINQ86UA6 219 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 WNT8BQ93098 351 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 TMEM60Q9H2L4 133 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 CEP131Q9UPN4 1083 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 PCDHA2Q9Y5H9 948 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 COL1A2P08123 1366 aa8.04□□□□□ -1.12
PDLIM5-215ENST00000511586 SMIM35A0A1B0GVV1 85 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 VPS37CA5D8V6 355 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 DDX11L8A8MPP1 907 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 RSPH10B2B2RC85 870 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 ZBTB42B2RXF5 422 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 LAD1O00515 517 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 MAGEB2O15479 319 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 FGBP02675 491 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 OR52Z1P0C646 297 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 RSPH10BP0C881 870 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 ACRP10323 421 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 ACTN1P12814 892 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 PDIA4P13667 645 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 SYT1P21579 422 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 TECP42680 631 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 SPIRE1Q08AE8 756 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 PTGDRQ13258 359 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 NBR1Q14596 966 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 XKR3Q5GH77 459 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 C9orf50Q5SZB4 431 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 MTHFD1LQ6UB35 978 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 RUFY4Q6ZNE9 571 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 ZNF365Q70YC5 407 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 C16orf59Q7L2K0 433 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 BRAPQ7Z569 592 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 DEFB128Q7Z7B8 93 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 NME8Q8N427 588 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 BANK1Q8NDB2 785 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 NEK9Q8TD19 979 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 TRAPPC12Q8WVT3 735 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 DNAJB3Q8WWF6 145 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 NIFKQ9BYG3 293 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 FTOQ9C0B1 505 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 MTIF3Q9H2K0 278 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 PCDHB6Q9Y5E3 794 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 LTBP2Q14767 1821 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 CEP290O15078 2479 aa8.03□□□□□ -1.12
PDLIM5-215ENST00000511586 M0QZ92 97 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 STBD1O95210 358 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 CYP4A11Q02928 519 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 GPNMBQ14956 572 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 TMEM266Q2M3C6 531 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 LRIT3Q3SXY7 679 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 FAM26DQ5JW98 314 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 IER5Q5VY09 327 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 TRAF7Q6Q0C0 670 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 OTUD6AQ7L8S5 288 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 OTOP2Q7RTS6 562 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 TPH2Q8IWU9 490 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 C4orf19Q8IY42 314 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 C4orf32Q8N8J7 132 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 HERVK_113Q902F9 699 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 VWCEQ96DN2 955 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 ZBTB10Q96DT7 871 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 DYDC2Q96IM9 177 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 RNPC3Q96LT9 517 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 HSD17B14Q9BPX1 270 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 EIF2AK1Q9BQI3 630 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 RAB34Q9BZG1 259 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 FAM49AQ9H0Q0 323 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 ZSWIM4Q9H7M6 989 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 RGL1Q9NZL6 768 aa8.02□□□□□ -1.13
PDLIM5-215ENST00000511586 SEPT9Q9UHD8 586 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms