RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PPP1R11O60927 126 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 FUCA1P04066 466 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 NTRK1P04629 796 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 THBDP07204 575 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 PABPC1P11940 636 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 ECI1P42126 302 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 KIAA2012Q0VF49 1180 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 MAP4K2Q12851 820 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 ZC3H12BQ5HYM0 836 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 FOXB2Q5VYV0 432 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 IQCEQ6IPM2 695 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 NSMFQ6X4W1 530 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 JAZF1Q86VZ6 243 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 ZNF761Q86XN6 746 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 SCUBE1Q8IWY4 988 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 TMEM145Q8NBT3 493 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 KREMEN2Q8NCW0 462 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 NPLOC4Q8TAT6 608 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 SH3TC2Q8TF17 1288 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 FRS2Q8WU20 508 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 OSBP2Q969R2 916 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 BCAS3Q9H6U6 928 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 KANSL2Q9H9L4 492 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 GPRC5CQ9NQ84 441 aa5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 MARF1Q9Y4F3 1742 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-208ENST00000511439 CHD2O14647 1828 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 KIAA1107Q9UPP5 1409 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 LOC105371045A0A1W2PR82 267 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 TLDC2A0PJX2 215 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 PRODHO43272 600 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 ITGB3P05106 788 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 PLS3P13797 630 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 RPL13P26373 211 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 MAGEA10P43363 369 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 KCNJ6P48051 423 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 SLC6A11P48066 632 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 SQSTM1Q13501 440 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 PRSS53Q2L4Q9 553 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 FAM26FQ5R3K3 315 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 SLC35F1Q5T1Q4 408 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 MIB1Q86YT6 1006 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 TTLL6Q8N841 843 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 KYQ8NBH2 561 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 PLEKHO2Q8TD55 490 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 ADAMTS17Q8TE56 1095 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 KCTD13Q8WZ19 329 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 DDX1Q92499 740 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 SEC14L1Q92503 715 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 DDX17Q92841 729 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 KISS1RQ969F8 398 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 DDX11Q96FC9 970 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 EXOC2Q96KP1 924 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 NOX5Q96PH1 765 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 CDC6Q99741 560 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 SPATA6Q9NWH7 488 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 TMEM260Q9NX78 707 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 MARCH2Q9P0N8 246 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 CLEC1BQ9P126 229 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 TBX22Q9Y458 520 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 PTCH2Q9Y6C5 1203 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 MRPL42Q9Y6G3 142 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 ADGRB3O60242 1522 aa5.18□□□□□ -1.58
TOPBP1-208ENST00000511439 MAP3K5Q99683 1374 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 ABCC5O15440 1437 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 TMEM131LA2VDJ0 1609 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 PIK3C2BO00750 1634 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 LAMC1P11047 1609 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 ARNTLO00327 626 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 GTF2A2P52657 109 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 TESK1Q15569 626 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 VPS72Q15906 364 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 FAM209AQ5JX71 171 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 ACBD5Q5T8D3 534 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 MROH9Q5TGP6 573 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 E4F1Q66K89 784 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 DENND5AQ6IQ26 1287 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 BORAQ6PGQ7 559 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 RIOX2Q8IUF8 465 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 LGI4Q8N135 537 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 TTC9BQ8N6N2 239 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 ZSWIM2Q8NEG5 633 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 DHRS4Q9BTZ2 278 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 C11orf84Q9BUA3 381 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 SMPD4Q9NXE4 827 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 DUSP10Q9Y6W6 482 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 USP19O94966 1318 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 NEXMIFQ5QGS0 1516 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 WDR90Q96KV7 1748 aa5.17□□□□□ -1.58
TOPBP1-208ENST00000511439 CASZ1Q86V15 1759 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 TRBV23-1A0A0A0MS06 115 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 CCDC163A0A0D9SF12 145 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 C8BP07358 591 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 INSRRP14616 1297 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 THBS2P35442 1172 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 RPL11P62913 178 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 SMAD4Q13485 552 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 CCDC103Q8IW40 242 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 SAMD11Q96NU1 681 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 GORASP1Q9BQQ3 440 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 TMPRSS5Q9H3S3 457 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms