RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 CXCR5P32302 372 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 LSP1P33241 339 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 CCT5P48643 541 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 TNNI2P48788 182 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 GUCY2DQ02846 1103 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 PTK2Q05397 1052 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 PTGISQ16647 500 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 C6orf89Q6UWU4 347 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 AMIGO3Q86WK7 504 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 TPCN2Q8NHX9 752 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 LENG9Q96B70 501 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 HES6Q96HZ4 224 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 GDAP1L1Q96MZ0 367 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 A1CFQ9NQ94 594 aaKnown RBP10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 SERPINB13Q9UIV8 391 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 CCNL1Q9UK58 526 aaPredicted RBP10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 HDAC9Q9UKV0 1011 aa10.11□□□□□ -0.79
PDGFRA-208ENST00000509490 FRMPD2Q68DX3 1309 aaPredicted RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 FLOT1O75955 427 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 GAP43P17677 238 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 MDH1P40925 334 aaKnown RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 NAP1L1P55209 391 aaKnown RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 FKBP1AP62942 108 aaKnown RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 ERVK-9P63128 1117 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 PRPF38AQ8NAV1 312 aaKnown RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 ERMNQ8TAM6 284 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 TAF4BQ92750 862 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 DRC1Q96MC2 740 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 ANO3Q9BYT9 981 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 TANGO6Q9C0B7 1094 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 VAT1LQ9HCJ6 419 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 NLRC4Q9NPP4 1024 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 SMARCAL1Q9NZC9 954 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 ARMCX3Q9UH62 379 aaPredicted RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 SLC12A6Q9UHW9 1150 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 KIAA1024Q9UPX6 916 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 E9PMD0 336 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 PGRMC1O00264 195 aaKnown RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 MEFVO15553 781 aaPredicted RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 MED24O75448 989 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 SPATA31C1P0DKV0 1188 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 FERP16591 822 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 NR1D1P20393 614 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 RPL13P26373 211 aaKnown RBP10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 SREBF1P36956 1147 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 MYBPC2Q14324 1141 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 SLC4A8Q2Y0W8 1093 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 ARMC9Q7Z3E5 817 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 SP8Q8IXZ3 490 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 VTI1AQ96AJ9 217 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 KRT12Q99456 494 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 FRMPD4Q14CM0 1322 aa10.1□□□□□ -0.79
PDGFRA-208ENST00000509490 PIK3CDO00329 1044 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 MEIS2O14770 477 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 FAM107AO95990 144 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 RFX1P22670 979 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 DRG2P55039 364 aaKnown RBP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 RAPGEF1Q13905 1077 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 HERC4Q5GLZ8 1057 aaPredicted RBP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 DPP8Q6V1X1 898 aaPredicted RBP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 RUFY4Q6ZNE9 571 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 ANKRD13CQ8N6S4 541 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 GMCL1P1Q8NEA9 526 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 CENPTQ96BT3 561 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 RNPC3Q96LT9 517 aaKnown RBP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 ANKRD31Q8N7Z5 1873 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 ERLIN2O94905 339 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 NR2F2P24468 414 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 ATP2B2Q01814 1243 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 PPATQ06203 517 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 DDR1Q08345 913 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 UBE2SQ16763 222 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 EXOC3L4Q17RC7 722 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 BTNL9Q6UXG8 535 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 LRRC47Q8N1G4 583 aaKnown RBP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 FAM133AQ8N9E0 248 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 P3H4Q92791 437 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 RPGRQ92834 1020 aaKnown RBP10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 SLC35C1Q96A29 364 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 GMCL1Q96IK5 515 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 PACSIN1Q9BY11 444 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 POLLQ9UGP5 575 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 ADAMTS1Q9UHI8 967 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 VAV3Q9UKW4 847 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 ASTN1O14525 1302 aa10.09□□□□□ -0.79
PDGFRA-208ENST00000509490 POTEB3A0JP26 581 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 POTECB2RU33 542 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 FTCDO95954 541 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 TMEM253P0C7T8 217 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 GUCY2CP25092 1073 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 RFC4P35249 363 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 UAP1Q16222 522 aaPredicted RBP10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 NAA35Q5VZE5 725 aa10.08□□□□□ -0.8
PDGFRA-208ENST00000509490 ALKBH5Q6P6C2 394 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms