RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 REC8O95072 547 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 FAM86B2P0C5J1 330 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 RPS6KB1P23443 525 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 KLRC1P26715 233 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 SLC26A2P50443 739 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 SWSAP1Q6NVH7 229 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 PDXDC2PQ6P474 469 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 MTHFD1LQ6UB35 978 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 ABHD15Q6UXT9 468 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 EP400NLQ6ZTU2 488 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 CKAP2LQ8IYA6 745 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 PHKBQ93100 1093 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 ZNF577Q9BSK1 485 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
TPM3-219ENST00000509409 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 AGO3Q9H9G7 860 aaKnown RBP17.49■□□□□ 0.39
TPM3-219ENST00000509409 ZNF302Q9NR11 478 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 KAT6AQ92794 2004 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.48■□□□□ 0.39
TPM3-219ENST00000509409 SMIM35A0A1B0GVV1 85 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 IPO5O00410 1097 aaKnown RBP17.48■□□□□ 0.39
TPM3-219ENST00000509409 CCNE2O96020 404 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 CYP3A4P08684 503 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 IBSPP21815 317 aaPredicted RBP17.48■□□□□ 0.39
TPM3-219ENST00000509409 KCNA5P22460 613 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 BMPR1AP36894 532 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 PAK2Q13177 524 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 BTG3Q14201 252 aaPredicted RBP17.48■□□□□ 0.39
TPM3-219ENST00000509409 TIGD5Q53EQ6 642 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
TPM3-219ENST00000509409 REXO1Q8N1G1 1221 aaKnown RBP17.48■□□□□ 0.39
TPM3-219ENST00000509409 BANK1Q8NDB2 785 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 SLC26A6Q9BXS9 759 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 FTHL17Q9BXU8 183 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 PADI3Q9ULW8 664 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 GINS2Q9Y248 185 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 RWDD3Q9Y3V2 267 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
TPM3-219ENST00000509409 TCF20Q9UGU0 1960 aaKnown RBP17.48■□□□□ 0.39
TPM3-219ENST00000509409 ESYT2A0FGR8 921 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 RB1P06400 928 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 COL9A1P20849 921 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 CCT2P78371 535 aaKnown RBP17.47■□□□□ 0.39
TPM3-219ENST00000509409 KRT76Q01546 638 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 NFX1Q12986 1120 aaKnown RBP17.47■□□□□ 0.39
TPM3-219ENST00000509409 PKN1Q16512 942 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 ZNF484Q5JVG2 852 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 ATP8B4Q8TF62 1192 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 TBC1D22BQ9NU19 505 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 MICAL3Q7RTP6 2002 aa17.47■□□□□ 0.39
TPM3-219ENST00000509409 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 ADAMTS3O15072 1205 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 DHX15O43143 795 aaKnown RBP17.46■□□□□ 0.39
TPM3-219ENST00000509409 STAG3L1P0CL83 205 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
TPM3-219ENST00000509409 LEXMQ3ZCV2 418 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 PRR16Q569H4 304 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 TCEAL5Q5H9L2 206 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 RTN4RL1Q86UN2 441 aaPredicted RBP17.46■□□□□ 0.39
TPM3-219ENST00000509409 CCDC60Q8IWA6 550 aaPredicted RBP17.46■□□□□ 0.39
TPM3-219ENST00000509409 RASGRP4Q8TDF6 673 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 C11orf84Q9BUA3 381 aaPredicted RBP17.46■□□□□ 0.39
TPM3-219ENST00000509409 NSUN3Q9H649 340 aaKnown RBP17.46■□□□□ 0.39
TPM3-219ENST00000509409 LRFN2Q9ULH4 789 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 SAMM50Q9Y512 469 aa17.46■□□□□ 0.39
TPM3-219ENST00000509409 ADGRA3Q8IWK6 1321 aa17.46■□□□□ 0.38
TPM3-219ENST00000509409 MUC3AQ02505 3323 aa17.46■□□□□ 0.38
TPM3-219ENST00000509409 IGLV3-22A0A075B6J6 115 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 DGKIO75912 1065 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 PSAPP07602 524 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 PDIA3P30101 505 aaKnown RBP17.45■□□□□ 0.38
TPM3-219ENST00000509409 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 ZNF746Q6NUN9 644 aaPredicted RBP17.45■□□□□ 0.38
TPM3-219ENST00000509409 FBXL16Q8N461 479 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 CCDC148Q8NFR7 591 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 ZNF689Q96CS4 500 aaPredicted RBP17.45■□□□□ 0.38
TPM3-219ENST00000509409 C1QTNF1Q9BXJ1 281 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 RNF26Q9BY78 433 aaPredicted RBP17.45■□□□□ 0.38
TPM3-219ENST00000509409 IGSF9BQ9UPX0 1349 aa17.45■□□□□ 0.38
TPM3-219ENST00000509409 RPS6KA5O75582 802 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 CSPG5O95196 566 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 IFNAR1P17181 557 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 NLRP5P59047 1200 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 PAN2Q504Q3 1202 aaKnown RBP17.44■□□□□ 0.38
TPM3-219ENST00000509409 PTCRAQ6ISU1 281 aaPredicted RBP17.44■□□□□ 0.38
TPM3-219ENST00000509409 NPAS4Q8IUM7 802 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 KIAA0319LQ8IZA0 1049 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 METTL13Q8N6R0 699 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.44■□□□□ 0.38
TPM3-219ENST00000509409 CRYGNQ8WXF5 182 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 LINC01599Q8WXQ3 324 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 AGXT2Q9BYV1 514 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 NCOA5Q9HCD5 579 aaKnown RBP17.44■□□□□ 0.38
TPM3-219ENST00000509409 VPS54Q9P1Q0 977 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 GABBR1Q9UBS5 961 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 PCDHA10Q9Y5I2 948 aa17.44■□□□□ 0.38
TPM3-219ENST00000509409 COL1A2P08123 1366 aa17.43■□□□□ 0.38
TPM3-219ENST00000509409 COL4A4P53420 1690 aaPredicted RBP17.43■□□□□ 0.38
TPM3-219ENST00000509409 C5orf67F2Z3F1 127 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms