RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 FAM177A1Q8N128 213 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 C4orf32Q8N8J7 132 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 MAFAQ8NHW3 353 aaPredicted RBP9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 PHOSPHO2Q8TCD6 241 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 WASF1Q92558 559 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 HAS1Q92839 578 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 VWCEQ96DN2 955 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 PRDM12Q9H4Q4 367 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 TBC1D22BQ9NU19 505 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 YBX2Q9Y2T7 364 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 TCHHQ07283 1943 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 ARID2Q68CP9 1835 aa9.89□□□□□ -0.83
PDLIM5-213ENST00000509357 ABHD14A-ACY1A0A1B0GW23 586 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 RRN3P2A6NIE6 340 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 TLL1O43897 1013 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 CAND2O75155 1236 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 CXCL10P02778 98 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 SPIRE1Q08AE8 756 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 LETM2Q2VYF4 491 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 TAF2Q6P1X5 1199 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 PLPPR4Q7Z2D5 763 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 TRMT1LQ7Z2T5 733 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 KRT25Q7Z3Z0 450 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 FERMT3Q86UX7 667 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 HERC6Q8IVU3 1022 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 FAM184AQ8NB25 1140 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 PPM1EQ8WY54 764 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 SEPT8Q92599 483 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 FAM49AQ9H0Q0 323 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 FOXP1Q9H334 677 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 KCNMB3Q9NPA1 279 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 TUBE1Q9UJT0 475 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 SAMM50Q9Y512 469 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 PCDHB6Q9Y5E3 794 aa9.88□□□□□ -0.83
PDLIM5-213ENST00000509357 COL6A3P12111 3177 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 POTEB3A0JP26 581 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 M0QZ92 97 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 PSMD10O75832 226 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 AMHP03971 560 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 CA3P07451 260 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 INSRRP14616 1297 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 HOXC8P31273 242 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 USP11P51784 963 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 WDR5P61964 334 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 MBTPS1Q14703 1052 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 GPNMBQ14956 572 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 PLCB4Q15147 1175 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 IL17AQ16552 155 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 Q4G0T1 1027 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 LARP1BQ659C4 914 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 SWSAP1Q6NVH7 229 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 PDXDC2PQ6P474 469 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 POTEBQ6S5H4 581 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 RUFY4Q6ZNE9 571 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 NEK8Q86SG6 692 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 NOSTRINQ8IVI9 506 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 DBF4BQ8NFT6 615 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 DNAJB3Q8WWF6 145 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 SLC5A5Q92911 643 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 CERS4Q9HA82 394 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 ZNF302Q9NR11 478 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 VAV3Q9UKW4 847 aa9.87□□□□□ -0.83
PDLIM5-213ENST00000509357 MYH9P35579 1960 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 EML1O00423 815 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 CHMP2AO43633 222 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 MARCH6O60337 910 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 GAS7O60861 476 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 PSAPP07602 524 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 ATP4AP20648 1035 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 SLC26A2P50443 739 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 KRT76Q01546 638 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 UGCGQ16739 394 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 IER5Q5VY09 327 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 PPP4R3AQ6IN85 833 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 ZNF746Q6NUN9 644 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 MOXD1Q6UVY6 613 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 ABHD15Q6UXT9 468 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 TMCO2Q7Z6W1 182 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 MYOCDQ8IZQ8 938 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 MICALL1Q8N3F8 863 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 TRAPPC12Q8WVT3 735 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 ARNTL2Q8WYA1 636 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 ZBTB10Q96DT7 871 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 MTMR9Q96QG7 549 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 CDH23Q9H251 3354 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 UNC45AQ9H3U1 944 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 WRAP73Q9P2S5 460 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 DDX25Q9UHL0 483 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 PCDHA10Q9Y5I2 948 aa9.86□□□□□ -0.83
PDLIM5-213ENST00000509357 SCN5AQ14524 2016 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 IGKV6D-21A0A0A0MT36 114 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 VPS37CA5D8V6 355 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 WDR64B1ANS9 1081 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 STX6O43752 255 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 HBP1O60381 514 aa9.85□□□□□ -0.83
PDLIM5-213ENST00000509357 CCNT1O60563 726 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms