RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 MATR3P43243 847 aaKnown RBP eCLIP12.04□□□□□ -0.485e-7■■■■□ 23.2
SEC31A-228ENST00000509142 CASP5P51878 434 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 SPIRE1Q08AE8 756 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 MYCT1Q8N699 235 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 AENQ8WTP8 325 aaKnown RBP12.04□□□□□ -0.48
SEC31A-228ENST00000509142 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 LENG9Q96B70 501 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
SEC31A-228ENST00000509142 QSER1Q2KHR3 1735 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 ATRNL1Q5VV63 1379 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 SSU72P8A0A1W2PR75 194 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 TLR2O60603 784 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 GAS7O60861 476 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 XRCC5P13010 732 aaKnown RBP12.04□□□□□ -0.48
SEC31A-228ENST00000509142 RXRBP28702 533 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 CIITAP33076 1130 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 PAFAH1B1P43034 410 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 DNA2P51530 1060 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 ASIC2Q16515 512 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 FAM151AQ8WW52 585 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 ZBTB21Q9ULJ3 1066 aa12.04□□□□□ -0.48
SEC31A-228ENST00000509142 MRPL11Q9Y3B7 192 aaKnown RBP12.04□□□□□ -0.48
SEC31A-228ENST00000509142 RSPH10B2B2RC85 870 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 RSPH10BP0C881 870 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 MYBP10242 640 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 EPB41P11171 864 aaKnown RBP12.03□□□□□ -0.48
SEC31A-228ENST00000509142 SLC15A2Q16348 729 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 SLC30A10Q6XR72 485 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 TTLL6Q8N841 843 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 CRYGNQ8WXF5 182 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 MED4Q9NPJ6 270 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
SEC31A-228ENST00000509142 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 NOL4O94818 638 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 EYA4O95677 639 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 SLX4Q8IY92 1834 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 TULP1O00294 542 aaPredicted RBP12.03□□□□□ -0.48
SEC31A-228ENST00000509142 EML1O00423 815 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 CLIC2O15247 247 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 MMP14P50281 582 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 ZNF572Q7Z3I7 529 aaPredicted RBP12.03□□□□□ -0.48
SEC31A-228ENST00000509142 SPATA4Q8NEY3 305 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 POLR3CQ9BUI4 534 aaPredicted RBP12.03□□□□□ -0.48
SEC31A-228ENST00000509142 RUSC1Q9BVN2 902 aa12.03□□□□□ -0.48
SEC31A-228ENST00000509142 RRP15Q9Y3B9 282 aaKnown RBP12.03□□□□□ -0.48
SEC31A-228ENST00000509142 PPP1R12BO60237 982 aaPredicted RBP12.02□□□□□ -0.48
SEC31A-228ENST00000509142 AFPP02771 609 aaKnown RBP12.02□□□□□ -0.48
SEC31A-228ENST00000509142 ARHGAP27Q6ZUM4 889 aa12.02□□□□□ -0.48
SEC31A-228ENST00000509142 C10orf67Q8IYJ2 551 aa12.02□□□□□ -0.48
SEC31A-228ENST00000509142 TSEN2Q8NCE0 465 aaKnown RBP12.02□□□□□ -0.48
SEC31A-228ENST00000509142 DYDC2Q96IM9 177 aa12.02□□□□□ -0.48
SEC31A-228ENST00000509142 MS4A14Q96JA4 679 aa12.02□□□□□ -0.48
SEC31A-228ENST00000509142 OSBPL9Q96SU4 736 aa12.02□□□□□ -0.48
SEC31A-228ENST00000509142 TLR10Q9BXR5 811 aa12.02□□□□□ -0.48
SEC31A-228ENST00000509142 HYOU1Q9Y4L1 999 aa12.02□□□□□ -0.48
SEC31A-228ENST00000509142 FRMD3A2A2Y4 597 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 PDXKO00764 312 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 OPLAHO14841 1288 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 CYP3A4P08684 503 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 TCP1P17987 556 aaKnown RBP12.02□□□□□ -0.49
SEC31A-228ENST00000509142 EXOC3L4Q17RC7 722 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 KCTD19Q17RG1 926 aaPredicted RBP12.02□□□□□ -0.49
SEC31A-228ENST00000509142 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 ADAMTS1Q9UHI8 967 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 COL11A2P13942 1736 aaPredicted RBP12.02□□□□□ -0.49
SEC31A-228ENST00000509142 PIK3CDO00329 1044 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 EN1Q05925 392 aaPredicted RBP12.02□□□□□ -0.49
SEC31A-228ENST00000509142 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 MMGT1Q8N4V1 131 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 SYN2Q92777 582 aaPredicted RBP12.02□□□□□ -0.49
SEC31A-228ENST00000509142 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 METTL14Q9HCE5 456 aaKnown RBP12.02□□□□□ -0.49
SEC31A-228ENST00000509142 TYW1Q9NV66 732 aaKnown RBP12.02□□□□□ -0.49
SEC31A-228ENST00000509142 VAV3Q9UKW4 847 aa12.02□□□□□ -0.49
SEC31A-228ENST00000509142 NR3C1P04150 777 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 GAP43P17677 238 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
SEC31A-228ENST00000509142 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
SEC31A-228ENST00000509142 KLHDC7AQ5VTJ3 777 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 ZNF577Q9BSK1 485 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
SEC31A-228ENST00000509142 SYNPO2Q9UMS6 1093 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 TRAF3IP3Q9Y228 551 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 ZSCAN5CA6NGD5 496 aaPredicted RBP12.01□□□□□ -0.49
SEC31A-228ENST00000509142 ACTN1P12814 892 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 KIAA0753Q2KHM9 967 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 KIAA1755Q5JYT7 1200 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 RINT1Q6NUQ1 792 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 VCPKMTQ9H867 229 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 NRXN2Q9P2S2 1712 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 VGLL3A8MV65 326 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 DDX39AO00148 427 aaKnown RBP12.01□□□□□ -0.49
SEC31A-228ENST00000509142 SLC9A1P19634 815 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 CEP55Q53EZ4 464 aa12.01□□□□□ -0.49
SEC31A-228ENST00000509142 AEBP2Q6ZN18 517 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms