RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 SENP7Q9BQF6 1050 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 LXNQ9BS40 222 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 MMRN2Q9H8L6 949 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 NHEJ1Q9H9Q4 299 aaPredicted RBP10.18□□□□□ -0.78
HTT-205ENST00000509043 RAVER2Q9HCJ3 691 aaKnown RBP10.18□□□□□ -0.78
HTT-205ENST00000509043 LZTFL1Q9NQ48 299 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 HOXC10Q9NYD6 342 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 RGL1Q9NZL6 768 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 LARSQ9P2J5 1176 aaKnown RBP10.18□□□□□ -0.78
HTT-205ENST00000509043 KCNG1Q9UIX4 513 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 MRFAP1Q9Y605 127 aa10.18□□□□□ -0.78
HTT-205ENST00000509043 NPHP3-ACAD11A0A0J9YXS1 232 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 ANO9A1A5B4 782 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 WDR64B1ANS9 1081 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 POTEB2H3BUK9 544 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 DHX15O43143 795 aaKnown RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 GCNT3O95395 438 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 AFPP02771 609 aaKnown RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 NR3C1P04150 777 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 SCP2P22307 547 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 ARHGAP25P42331 645 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 QARSP47897 775 aaKnown RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 RPS6P62753 249 aaKnown RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 PGM5Q15124 567 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 WHAMMP3Q1A5X7 153 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 ARHGEF16Q5VV41 709 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 ZNF746Q6NUN9 644 aaPredicted RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 PDXDC1Q6P996 788 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 KIAA1328Q86T90 577 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 SLC9A9Q8IVB4 645 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 NELFCDQ8IXH7 590 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 FAM178BQ8IXR5 827 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 C4orf19Q8IY42 314 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 SMAP1Q8IYB5 467 aaPredicted RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 CPXCR1Q8N123 301 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 MYCT1Q8N699 235 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 GLIS3Q8NEA6 775 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 REPS2Q8NFH8 660 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 NSUN6Q8TEA1 469 aaKnown RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 WDR24Q96S15 920 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 RMDN3Q96TC7 470 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 CHP1Q99653 195 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 PDCD2LQ9BRP1 358 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 RUSC1Q9BVN2 902 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 TEX13BQ9BXU2 312 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 ST6GALNAC4Q9H4F1 302 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 TMEM206Q9H813 350 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 PXMP2Q9NR77 195 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 RNF146Q9NTX7 359 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 ANKEF1Q9NU02 776 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 AGPAT5Q9NUQ2 364 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 ARGLU1Q9NWB6 273 aaPredicted RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 TBC1D7Q9P0N9 293 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 CDC23Q9UJX2 597 aa10.17□□□□□ -0.78
HTT-205ENST00000509043 BZW2Q9Y6E2 419 aaKnown RBP10.17□□□□□ -0.78
HTT-205ENST00000509043 ATP8B3O60423 1300 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 NFASCO94856 1347 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 DICER1Q9UPY3 1922 aaKnown RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 CHMP2AO43633 222 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 TADA3O75528 432 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 SERPING1P05155 500 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 TAL1P17542 331 aaPredicted RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 PSMC2P35998 433 aaKnown RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 VAV2P52735 878 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 PSMC5P62195 406 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 MRPS9P82933 396 aaKnown RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 RBM10P98175 930 aaKnown RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 CACNB1Q02641 598 aaPredicted RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 KIF5AQ12840 1032 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 PPP2R5AQ15172 486 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 SLC9C1Q4G0N8 1177 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 MUM1L1Q5H9M0 696 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 C10orf76Q5T2E6 689 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 SFMBT2Q5VUG0 894 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 CATSPERGQ6ZRH7 1159 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 ZNF720Q7Z2F6 126 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 VSIG10LQ86VR7 867 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 C12orf56Q8IXR9 622 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 ACRBPQ8NEB7 543 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 CHST13Q8NET6 341 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.16□□□□□ -0.78
HTT-205ENST00000509043 BAP1Q92560 729 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 VTI1AQ96AJ9 217 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 HVCN1Q96D96 273 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 RPGRIP1Q96KN7 1286 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 DRC1Q96MC2 740 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 CCDC43Q96MW1 224 aaKnown RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 ACAD9Q9H845 621 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 C17orf75Q9HAS0 396 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 ADARB2Q9NS39 739 aaKnown RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 FAM207AQ9NSI2 230 aaPredicted RBP10.16□□□□□ -0.78
HTT-205ENST00000509043 GGA3Q9NZ52 723 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 AIPL1Q9NZN9 384 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 COL20A1Q9P218 1284 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 FBXO40Q9UH90 709 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 ZHX2Q9Y6X8 837 aa10.16□□□□□ -0.78
HTT-205ENST00000509043 ASTN1O14525 1302 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms