RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 HMGB1P09429 215 aaKnown RBP20.42■□□□□ 0.86
SKP2-204ENST00000508514 HSPA4P34932 840 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 BMPR1AP36894 532 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 PTPROQ16827 1216 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 POTEBQ6S5H4 581 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 NIPA1Q7RTP0 329 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 NEK9Q8TD19 979 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 CLP1Q92989 425 aaKnown RBP20.42■□□□□ 0.86
SKP2-204ENST00000508514 TMX1Q9H3N1 280 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 CDHR5Q9HBB8 845 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 TTC3P53804 2025 aa20.42■□□□□ 0.86
SKP2-204ENST00000508514 MYO7AQ13402 2215 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 SCG2P13521 617 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 METAP2P50579 478 aaKnown RBP eCLIP20.41■□□□□ 0.86
SKP2-204ENST00000508514 IER5Q5VY09 327 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 PLA2G4DQ86XP0 818 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 CCDC60Q8IWA6 550 aaPredicted RBP20.41■□□□□ 0.86
SKP2-204ENST00000508514 BRF1Q92994 677 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 JAKMIP1Q96N16 626 aaKnown RBP20.41■□□□□ 0.86
SKP2-204ENST00000508514 AGXT2Q9BYV1 514 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 CELF4Q9BZC1 486 aaKnown RBP20.41■□□□□ 0.86
SKP2-204ENST00000508514 ZMYND12Q9H0C1 365 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 NAP1L2Q9ULW6 460 aaPredicted RBP20.41■□□□□ 0.86
SKP2-204ENST00000508514 PADI3Q9ULW8 664 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 TRPV2Q9Y5S1 764 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 SQORQ9Y6N5 450 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 ADGRA3Q8IWK6 1321 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 IGSF9BQ9UPX0 1349 aa20.41■□□□□ 0.86
SKP2-204ENST00000508514 SMIM35A0A1B0GVV1 85 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 ESYT2A0FGR8 921 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 PPFIA3O75145 1194 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 IL9P15248 144 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 KLRC1P26715 233 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 CTNNB1P35222 781 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 CAMK1Q14012 370 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 NID2Q14112 1375 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 NTRK3Q16288 839 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 NLRC5Q86WI3 1866 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 FAM178BQ8IXR5 827 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 FBXL16Q8N461 479 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 GLT8D2Q9H1C3 349 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 C11orf16Q9NQ32 467 aa20.4■□□□□ 0.86
SKP2-204ENST00000508514 KDM3AQ9Y4C1 1321 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 GRXCR2A6NFK2 248 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 H3BQ06 376 aaPredicted RBP20.39■□□□□ 0.85
SKP2-204ENST00000508514 PRPF3O43395 683 aaKnown RBP20.39■□□□□ 0.85
SKP2-204ENST00000508514 RB1P06400 928 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 ZNF76P36508 570 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 LTBRP36941 435 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 TIGD5Q53EQ6 642 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 KIAA0319LQ8IZA0 1049 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 ATP8B4Q8TF62 1192 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 TMEM40Q8WWA1 233 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 PHKBQ93100 1093 aa20.39■□□□□ 0.85
SKP2-204ENST00000508514 ATG2AQ2TAZ0 1938 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 IPO5O00410 1097 aaKnown RBP20.38■□□□□ 0.85
SKP2-204ENST00000508514 MGEA5O60502 916 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 GATMP50440 423 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 SLC26A2P50443 739 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 BTG3Q14201 252 aaPredicted RBP20.38■□□□□ 0.85
SKP2-204ENST00000508514 TMEM266Q2M3C6 531 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 PTCRAQ6ISU1 281 aaPredicted RBP20.38■□□□□ 0.85
SKP2-204ENST00000508514 SWSAP1Q6NVH7 229 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 NME8Q8N427 588 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 RASGRP4Q8TDF6 673 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 PABPC5Q96DU9 382 aaKnown RBP20.38■□□□□ 0.85
SKP2-204ENST00000508514 C1QTNF1Q9BXJ1 281 aa20.38■□□□□ 0.85
SKP2-204ENST00000508514 NSUN3Q9H649 340 aaKnown RBP20.38■□□□□ 0.85
SKP2-204ENST00000508514 MRPL42Q9Y6G3 142 aaKnown RBP20.38■□□□□ 0.85
SKP2-204ENST00000508514 RALGAPA2Q2PPJ7 1873 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 HBP1O60381 514 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 RPLP2P05387 115 aaKnown RBP20.37■□□□□ 0.85
SKP2-204ENST00000508514 RPS6KB1P23443 525 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 DNAJB1P25685 340 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 KRT76Q01546 638 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 BLOC1S2Q6QNY1 142 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 LENG9Q96B70 501 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 LRFN3Q9BTN0 628 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 ZNF302Q9NR11 478 aa20.37■□□□□ 0.85
SKP2-204ENST00000508514 CCDC196A0A1B0GTZ2 297 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 BACH1O14867 736 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 GTF2F1P35269 517 aaKnown RBP eCLIP20.36■□□□□ 0.85
SKP2-204ENST00000508514 EVCP57679 992 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 FGD1P98174 961 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 DLX2Q07687 328 aaPredicted RBP20.36■□□□□ 0.85
SKP2-204ENST00000508514 HYAL1Q12794 435 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 CTC1Q2NKJ3 1217 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 PDXDC2PQ6P474 469 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 NPAS4Q8IUM7 802 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 TNPO1Q92973 898 aaKnown RBP20.36■□□□□ 0.85
SKP2-204ENST00000508514 ZNF577Q9BSK1 485 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 C11orf84Q9BUA3 381 aaPredicted RBP20.36■□□□□ 0.85
SKP2-204ENST00000508514 FTHL17Q9BXU8 183 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 ERVK-5Q9HDB9 667 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 ALG13Q9NP73 1137 aaKnown RBP20.36■□□□□ 0.85
SKP2-204ENST00000508514 PLAGL2Q9UPG8 496 aa20.36■□□□□ 0.85
SKP2-204ENST00000508514 NOC2LQ9Y3T9 749 aaKnown RBP20.36■□□□□ 0.85
SKP2-204ENST00000508514 MAFBQ9Y5Q3 323 aaPredicted RBP20.36■□□□□ 0.85
SKP2-204ENST00000508514 PI4K2BG5E9Z4 385 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms