RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 RTEL1Q9NZ71 1219 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 PCDHA11Q9Y5I1 949 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 UBIAD1Q9Y5Z9 338 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 V9GY48 417 aaPredicted RBP9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 UNC80Q8N2C7 3258 aa9.12□□□□□ -0.95
UBE2D3-222ENST00000508238 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 GBF1Q92538 1859 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 TANC1Q9C0D5 1861 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 DOCK5Q9H7D0 1870 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 KLF18A0A0U1RQI7 1052 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 SPDYE3A6NKU9 549 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 NOP56O00567 594 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 BAIAP3O94812 1187 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 LGALS2P05162 132 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 NEFLP07196 543 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 CKBP12277 381 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 KCNA2P16389 499 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 ATP2A2P16615 1042 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 PSMA5P28066 241 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 CHMP4BP1P59074 171 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 KCNH2Q12809 1159 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 ERICH6BQ5W0A0 696 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 WWC2Q6AWC2 1192 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 TRAF7Q6Q0C0 670 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 LRRC8DQ7L1W4 858 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 CYFIP1Q7L576 1253 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 HEATR3Q7Z4Q2 680 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 DEFB128Q7Z7B8 93 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 RAB11FIP4Q86YS3 637 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 ALG1Q9BT22 464 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 JADE2Q9NQC1 790 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 BARHL2Q9NY43 387 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 PCDHA6Q9UN73 950 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 FCF1Q9Y324 198 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 PCDHA8Q9Y5H6 950 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 SNX14Q9Y5W7 946 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 BDP1A6H8Y1 2624 aa9.11□□□□□ -0.95
UBE2D3-222ENST00000508238 TRANK1O15050 2925 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 STXBP3O00186 592 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 ATP9AO75110 1047 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 CAND2O75155 1236 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 FOSL2P15408 326 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 CDC27P30260 824 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 ADAM17P78536 824 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 ZNF200P98182 395 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 PFKFB3Q16875 520 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 BLOC1S2Q6QNY1 142 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 MAFAQ8NHW3 353 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 MYLIPQ8WY64 445 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 JAKMIP1Q96N16 626 aaKnown RBP9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 SLC9A7Q96T83 725 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 FTOQ9C0B1 505 aaKnown RBP eCLIP9.1□□□□□ -0.958e-9■□□□□ 8.1
UBE2D3-222ENST00000508238 RNPEPQ9H4A4 650 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 EHMT1Q9H9B1 1298 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 SLC28A3Q9HAS3 691 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 YBX2Q9Y2T7 364 aaKnown RBP9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 VCANP13611 3396 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 NID2Q14112 1375 aa9.1□□□□□ -0.95
UBE2D3-222ENST00000508238 EMSYQ7Z589 1322 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 ABHD14A-ACY1A0A1B0GW23 586 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 GSTTP1A0A1W2PQM5 241 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 ESYT2A0FGR8 921 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 C17orf102A2RUQ5 167 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 SMCO2A6NFE2 343 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 GOLGA8AA7E2F4 631 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 GOLGA8BA8MQT2 603 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 ZBBXA8MT70 800 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 MEIS1O00470 390 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 PRPF3O43395 683 aaKnown RBP9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 SORBS3O60504 671 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 NBNO60934 754 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 EFCAB14O75071 495 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 SMIM10L2AP0DMW4 78 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 SMIM10L2BP0DMW5 78 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 GNAT1P11488 350 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 RPS6KB1P23443 525 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 ADD1P35611 737 aaKnown RBP9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 GGCXP38435 758 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 METAP2P50579 478 aaKnown RBP eCLIP9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 ADCY7P51828 1080 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 NAPAP54920 295 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 FGD1P98174 961 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 AP3B2Q13367 1082 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 MTMR1Q13613 665 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 MBTPS1Q14703 1052 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 UBE2SQ16763 222 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 ZNF618Q5T7W0 954 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 MCTP2Q6DN12 878 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 CNKSR3Q6P9H4 555 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 Q6ZUG5 572 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 RPAINQ86UA6 219 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 CRYGNQ8WXF5 182 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 SEPT1Q8WYJ6 367 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 BRF1Q92994 677 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 ATP6V0A1Q93050 837 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 WNT8BQ93098 351 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 MXRA8Q9BRK3 442 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 TM6SF1Q9BZW5 370 aa9.09□□□□□ -0.95
UBE2D3-222ENST00000508238 KCNH7Q9NS40 1196 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms