RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 CXXC1Q9P0U4 656 aaPredicted RBP17.63■□□□□ 0.41
COL1A1-211ENST00000507689 GTF3C3Q9Y5Q9 886 aa17.63■□□□□ 0.41
COL1A1-211ENST00000507689 MBLAC1A4D2B0 266 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-211ENST00000507689 TBX3O15119 743 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 NBNO60934 754 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 CXCL10P02778 98 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 ADAM17P78536 824 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 NR5A1Q13285 461 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 Q7L0L9 218 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 RPAINQ86UA6 219 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 NME8Q8N427 588 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 DNAJB3Q8WWF6 145 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 APBB2Q92870 758 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 WNT8BQ93098 351 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 FAM161BQ96MY7 647 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 TBC1D32Q96NH3 1257 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 SLC28A3Q9HAS3 691 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 PCDHA2Q9Y5H9 948 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 MAFBQ9Y5Q3 323 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-211ENST00000507689 TANC1Q9C0D5 1861 aa17.62■□□□□ 0.41
COL1A1-211ENST00000507689 KAT6AQ92794 2004 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 BTBD18B2RXH4 712 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 AMHP03971 560 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 TMOD1P28289 359 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 MTHFD1LQ6UB35 978 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 MBOAT7Q96N66 472 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 UNC45AQ9H3U1 944 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 PCDHA11Q9Y5I1 949 aa17.61■□□□□ 0.41
COL1A1-211ENST00000507689 SMIM35A0A1B0GVV1 85 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 GRXCR1A8MXD5 290 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 MAGEB2O15479 319 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 PSMD10O75832 226 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 KLRC1P26715 233 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 MRPS6P82932 125 aaKnown RBP17.6■□□□□ 0.41
COL1A1-211ENST00000507689 GUCY1B3Q02153 619 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 FAM26DQ5JW98 314 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 RUFY4Q6ZNE9 571 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 METTL13Q8N6R0 699 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 ETNPPLQ8TBG4 499 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 PBX4Q9BYU1 374 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 SEMA6BQ9H3T3 888 aa17.6■□□□□ 0.41
COL1A1-211ENST00000507689 NOL7Q9UMY1 257 aaKnown RBP17.6■□□□□ 0.41
COL1A1-211ENST00000507689 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-211ENST00000507689 SLC37A4O43826 429 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 OATP04181 439 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 PRKCEQ02156 737 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 CALCRLQ16602 461 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 ODR4Q5SWX8 454 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 MARCH8Q5T0T0 291 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 USP38Q8NB14 1042 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 DBF4BQ8NFT6 615 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 TRAPPC12Q8WVT3 735 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 MAP7D2Q96T17 732 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 IFIH1Q9BYX4 1025 aaKnown RBP17.59■□□□□ 0.41
COL1A1-211ENST00000507689 FOXP1Q9H334 677 aaPredicted RBP17.59■□□□□ 0.41
COL1A1-211ENST00000507689 ZNF576Q9H609 170 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 MTMR10Q9NXD2 777 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 TRPV2Q9Y5S1 764 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 CDY2AQ9Y6F7 541 aa17.59■□□□□ 0.41
COL1A1-211ENST00000507689 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
COL1A1-211ENST00000507689 IGSF9BQ9UPX0 1349 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 TLL1O43897 1013 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 NEMFO60524 1076 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 WDR5P61964 334 aaKnown RBP17.58■□□□□ 0.4
COL1A1-211ENST00000507689 PLEKHG4Q58EX7 1191 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 PPP2R2DQ66LE6 453 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 HERC6Q8IVU3 1022 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 GJA10Q969M2 543 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 SEPT9Q9UHD8 586 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-211ENST00000507689 GINS2Q9Y248 185 aa17.58■□□□□ 0.4
COL1A1-211ENST00000507689 H3BQV1 296 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 EDIL3O43854 480 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 GHRP10912 638 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 PBX2P40425 430 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 DNM2P50570 870 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 RABGGTBP53611 331 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 PSMC5P62195 406 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 TBC1D8BQ0IIM8 1120 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 ST3GAL1Q11201 340 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 PPP2R5CQ13362 524 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 XKR3Q5GH77 459 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 NCAPH2Q6IBW4 605 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 TRAF7Q6Q0C0 670 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 TMX3Q96JJ7 454 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 SCLT1Q96NL6 688 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 GAS2L1Q99501 681 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-211ENST00000507689 JPH2Q9BR39 696 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-211ENST00000507689 BACH2Q9BYV9 841 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 NKX2-4Q9H2Z4 354 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 KCNMB3Q9NPA1 279 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 PCDHA12Q9UN75 941 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 SQORQ9Y6N5 450 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 SCN5AQ14524 2016 aa17.57■□□□□ 0.4
COL1A1-211ENST00000507689 RANBP2P49792 3224 aaKnown RBP17.57■□□□□ 0.4
COL1A1-211ENST00000507689 DDX11L8A8MPP1 907 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms