RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GJA10Q969M2 543 aa18.79■□□□□ 0.6
SNCA-209ENST00000506244 FGBP02675 491 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 ACRP10323 421 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 PDCP20941 246 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 PRKCEQ02156 737 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 ZNF618Q5T7W0 954 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 ZNF365Q70YC5 407 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 DEFB128Q7Z7B8 93 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 HERVK_113Q902F9 699 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 HAS1Q92839 578 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 WNT8BQ93098 351 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 VAV3Q9UKW4 847 aa18.78■□□□□ 0.6
SNCA-209ENST00000506244 RSPH10B2B2RC85 870 aa18.77■□□□□ 0.6
SNCA-209ENST00000506244 OATP04181 439 aa18.77■□□□□ 0.6
SNCA-209ENST00000506244 RSPH10BP0C881 870 aa18.77■□□□□ 0.6
SNCA-209ENST00000506244 FXR1P51114 621 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNCA-209ENST00000506244 TTC38Q5R3I4 469 aa18.77■□□□□ 0.6
SNCA-209ENST00000506244 MCTP1Q6DN14 999 aa18.77■□□□□ 0.6
SNCA-209ENST00000506244 INTS4Q96HW7 963 aaKnown RBP18.77■□□□□ 0.6
SNCA-209ENST00000506244 FTOQ9C0B1 505 aaKnown RBP eCLIP18.77■□□□□ 0.6
SNCA-209ENST00000506244 NRBP2Q9NSY0 501 aa18.77■□□□□ 0.6
SNCA-209ENST00000506244 M0QZ92 97 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 BAIAP3O94812 1187 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 CTSHP09668 335 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 ATP2B1P20020 1258 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 MCM7P33993 719 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 MARCH8Q5T0T0 291 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 LARP1BQ659C4 914 aaKnown RBP18.76■□□□□ 0.59
SNCA-209ENST00000506244 C16orf59Q7L2K0 433 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 SNX21Q969T3 373 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 PCDHA12Q9UN75 941 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 PCDHA2Q9Y5H9 948 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 SCN5AQ14524 2016 aa18.76■□□□□ 0.59
SNCA-209ENST00000506244 WDR81Q562E7 1941 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 SMIM35A0A1B0GVV1 85 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 EFCAB14O75071 495 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 CXCL10P02778 98 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 PSMC5P62195 406 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 XKR3Q5GH77 459 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 NCAPH2Q6IBW4 605 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 GPR153Q6NV75 609 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 CNKSR3Q6P9H4 555 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 TRAF7Q6Q0C0 670 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 MTHFD1LQ6UB35 978 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 RUFY4Q6ZNE9 571 aa18.75■□□□□ 0.59
SNCA-209ENST00000506244 ZBBXA8MT70 800 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 MAGEB2O15479 319 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 P4HBP07237 508 aaKnown RBP18.74■□□□□ 0.59
SNCA-209ENST00000506244 OR52Z1P0C646 297 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 ATP4AP20648 1035 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
SNCA-209ENST00000506244 SMAD3P84022 425 aaKnown RBP18.74■□□□□ 0.59
SNCA-209ENST00000506244 EPHA7Q15375 998 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 UGCGQ16739 394 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 RILPL1Q5EBL4 403 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 FAM26DQ5JW98 314 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 RASIP1Q5U651 963 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 OTOP2Q7RTS6 562 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 NEK9Q8TD19 979 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 TRAPPC12Q8WVT3 735 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 FAM49AQ9H0Q0 323 aaPredicted RBP18.74■□□□□ 0.59
SNCA-209ENST00000506244 TTC12Q9H892 705 aaPredicted RBP18.74■□□□□ 0.59
SNCA-209ENST00000506244 LAMA3Q16787 3333 aa18.74■□□□□ 0.59
SNCA-209ENST00000506244 WNT7AO00755 349 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 ZNF862O60290 1169 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 NBNO60934 754 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 KLRC1P26715 233 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 TXKP42681 527 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 MRPS6P82932 125 aaKnown RBP18.73■□□□□ 0.59
SNCA-209ENST00000506244 SPIRE1Q08AE8 756 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 TMEM266Q2M3C6 531 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 IER5Q5VY09 327 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 NME8Q8N427 588 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 BANK1Q8NDB2 785 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 DNAJB3Q8WWF6 145 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 MTMR9Q96QG7 549 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 SEPT9Q9UHD8 586 aaPredicted RBP18.73■□□□□ 0.59
SNCA-209ENST00000506244 SLC4A7Q9Y6M7 1214 aa18.73■□□□□ 0.59
SNCA-209ENST00000506244 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.72■□□□□ 0.59
SNCA-209ENST00000506244 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.72■□□□□ 0.59
SNCA-209ENST00000506244 ZBTB42B2RXF5 422 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 EML1O00423 815 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 LAD1O00515 517 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 SOX1O00570 391 aaPredicted RBP18.72■□□□□ 0.59
SNCA-209ENST00000506244 C22orf31O95567 290 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 TMOD1P28289 359 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 KCNJ6P48051 423 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 TBC1D8BQ0IIM8 1120 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 ZNF174Q15697 407 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 TRMT1LQ7Z2T5 733 aaKnown RBP18.72■□□□□ 0.59
SNCA-209ENST00000506244 SEPT8Q92599 483 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 APBB2Q92870 758 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 VWCEQ96DN2 955 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 MAP7D2Q96T17 732 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 LXNQ9BS40 222 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 PPME1Q9Y570 386 aa18.72■□□□□ 0.59
SNCA-209ENST00000506244 ABHD14A-ACY1A0A1B0GW23 586 aa18.71■□□□□ 0.59
SNCA-209ENST00000506244 MBTPS1Q14703 1052 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms