RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 COL19A1Q14993 1142 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 PUS10Q3MIT2 529 aaKnown RBP12.97□□□□□ -0.33
SIL1-208ENST00000505945 PPP1R18Q6NYC8 613 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 UIMC1Q96RL1 719 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 CELF4Q9BZC1 486 aaKnown RBP12.97□□□□□ -0.33
SIL1-208ENST00000505945 ALG13Q9NP73 1137 aaKnown RBP12.97□□□□□ -0.33
SIL1-208ENST00000505945 BARHL2Q9NY43 387 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 NAP1L2Q9ULW6 460 aaPredicted RBP12.97□□□□□ -0.33
SIL1-208ENST00000505945 PADI3Q9ULW8 664 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 RWDD3Q9Y3V2 267 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 TRPV2Q9Y5S1 764 aa12.97□□□□□ -0.33
SIL1-208ENST00000505945 IGSF9BQ9UPX0 1349 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 GOLGA8AA7E2F4 631 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 GOLGA8BA8MQT2 603 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 CCNE2O96020 404 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 KLRC1P26715 233 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 LTBRP36941 435 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 SREBF1P36956 1147 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 CLK2P49760 499 aaKnown RBP12.96□□□□□ -0.33
SIL1-208ENST00000505945 KRT76Q01546 638 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 HYAL1Q12794 435 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 JAKMIP3Q5VZ66 844 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 MTHFD1LQ6UB35 978 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 CRIPAKQ8N1N5 446 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 FTHL17Q9BXU8 183 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 LMAN2LQ9H0V9 348 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 PLAGL2Q9UPG8 496 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 MRPL42Q9Y6G3 142 aaKnown RBP12.96□□□□□ -0.33
SIL1-208ENST00000505945 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
SIL1-208ENST00000505945 LOXHD1Q8IVV2 1947 aa12.96□□□□□ -0.34
SIL1-208ENST00000505945 IGKV6D-21A0A0A0MT36 114 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 SMIM35A0A1B0GVV1 85 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 FAM86B1E9PN63 330 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 hCG_1984214I3L0E3 225 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 BACH1O14867 736 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 ADAMTS3O15072 1205 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 NCK2O43639 380 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 FAM86B2P0C5J1 330 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 CPA1P15085 419 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 IBSPP21815 317 aaPredicted RBP12.95□□□□□ -0.34
SIL1-208ENST00000505945 GTF2F1P35269 517 aaKnown RBP eCLIP12.95□□□□□ -0.34
SIL1-208ENST00000505945 ADD1P35611 737 aaKnown RBP12.95□□□□□ -0.34
SIL1-208ENST00000505945 SLC26A2P50443 739 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 DLX2Q07687 328 aaPredicted RBP12.95□□□□□ -0.34
SIL1-208ENST00000505945 PAK2Q13177 524 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 CAMK1Q14012 370 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 CLUL1Q15846 466 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 TMEM266Q2M3C6 531 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 CTC1Q2NKJ3 1217 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 PAN2Q504Q3 1202 aaKnown RBP12.95□□□□□ -0.34
SIL1-208ENST00000505945 ABHD15Q6UXT9 468 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 PLA2G4DQ86XP0 818 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 NPAS4Q8IUM7 802 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 TEX2Q8IWB9 1127 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 CMTR2Q8IYT2 770 aaKnown RBP12.95□□□□□ -0.34
SIL1-208ENST00000505945 NME8Q8N427 588 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 ZNF713Q8N859 430 aaPredicted RBP12.95□□□□□ -0.34
SIL1-208ENST00000505945 PLVAPQ9BX97 442 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 TMX1Q9H3N1 280 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 GINS2Q9Y248 185 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 HCN4Q9Y3Q4 1203 aa12.95□□□□□ -0.34
SIL1-208ENST00000505945 ATG2AQ2TAZ0 1938 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 DHX15O43143 795 aaKnown RBP12.94□□□□□ -0.34
SIL1-208ENST00000505945 HBP1O60381 514 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 MMP1P03956 469 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 STAG3L1P0CL83 205 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 SCG2P13521 617 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 DNAJB1P25685 340 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 GATMP50440 423 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 FGD1P98174 961 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 NFX1Q12986 1120 aaKnown RBP12.94□□□□□ -0.34
SIL1-208ENST00000505945 KRT32Q14532 448 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 PFKFB3Q16875 520 aaPredicted RBP12.94□□□□□ -0.34
SIL1-208ENST00000505945 FAM160B1Q5W0V3 765 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 SWSAP1Q6NVH7 229 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 PDXDC2PQ6P474 469 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 NIPA1Q7RTP0 329 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 CCDC60Q8IWA6 550 aaPredicted RBP12.94□□□□□ -0.34
SIL1-208ENST00000505945 KIAA0319LQ8IZA0 1049 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 ATP8B4Q8TF62 1192 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 GLT8D2Q9H1C3 349 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 FAM50BQ9Y247 325 aa12.94□□□□□ -0.34
SIL1-208ENST00000505945 KDM3AQ9Y4C1 1321 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 IGLV3-22A0A075B6J6 115 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 IPO5O00410 1097 aaKnown RBP12.93□□□□□ -0.34
SIL1-208ENST00000505945 LINC01565O15544 149 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 ITGB1P05556 798 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 ALADP13716 330 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 ATP4AP20648 1035 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 ZP2Q05996 745 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 APOBRQ0VD83 1088 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 TRMT1LQ7Z2T5 733 aaKnown RBP12.93□□□□□ -0.34
SIL1-208ENST00000505945 KLHL23Q8NBE8 558 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 SPPL3Q8TCT6 385 aa12.93□□□□□ -0.34
SIL1-208ENST00000505945 TMEM40Q8WWA1 233 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms