RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NCLP19338 710 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 IBSPP21815 317 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 TXKP42681 527 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 GLRBP48167 497 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 LINC00310P59036 64 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 HTRA3P83110 453 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 SMAD3P84022 425 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 RTP5Q14D33 572 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 SMAD2Q15796 467 aaKnown RBP5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 PKN1Q16512 942 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 PRAMEF18Q5VWM3 479 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 C11orf74Q86VG3 221 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 PASD1Q8IV76 773 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 DTX3Q8N9I9 347 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 WDR66Q8TBY9 1149 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 IGDCC4Q8TDY8 1250 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 TMEM209Q96SK2 561 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 ARHGAP20Q9P2F6 1191 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 BRINP1O60477 761 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 IL18BPO95998 194 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 C8AP07357 584 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 PTGS1P23219 599 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 EVA1CP58658 441 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 ZNF385BQ569K4 471 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 BROXQ5VW32 411 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 ESRP1Q6NXG1 681 aaKnown RBP5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 TTLL6Q8N841 843 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 FOXRED1Q96CU9 486 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 CLIC6Q96NY7 704 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 AMNQ9BXJ7 453 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 ZMAT4Q9H898 229 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 INCENPQ9NQS7 918 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 DLL4Q9NR61 685 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 SPATA6Q9NWH7 488 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 MCM8Q9UJA3 840 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 CROTQ9UKG9 612 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 ASB1Q9Y576 335 aa5.64□□□□□ -1.51
TOPBP1-204ENST00000505804 LCHNA4D1U4 455 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 GPR39O43194 453 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 MPIG6BO95866 241 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 CDK11BP21127 795 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 FNTBP49356 437 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 CDKN1CP49918 316 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 TMPRSS15P98073 1019 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 DDB1Q16531 1140 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 VMACQ2NL98 169 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 LRSAM1Q6UWE0 723 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 RTN4RL1Q86UN2 441 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 CILP2Q8IUL8 1156 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 ADGRG2Q8IZP9 1017 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 STPG3Q8N7X2 389 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 ZNF526Q8TF50 670 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 RTF1Q92541 710 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 SLC5A5Q92911 643 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 DACT3Q96B18 629 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 SCYL1Q96KG9 808 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 TACO1Q9BSH4 297 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 BRINP2Q9C0B6 783 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 IRF2BPLQ9H1B7 796 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 MS4A5Q9H3V2 200 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 GALNT8Q9NY28 637 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 NOP58Q9Y2X3 529 aaKnown RBP5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 PHLDB1Q86UU1 1377 aa5.63□□□□□ -1.51
TOPBP1-204ENST00000505804 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 RFXAPO00287 272 aa5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 AFF3P51826 1226 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 MLLT6P55198 1093 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 DLX2Q07687 328 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 EPHA7Q15375 998 aa5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 TERF2Q15554 542 aa5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 RNF219Q5W0B1 726 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 HDGFL2Q7Z4V5 671 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 SAPCD2Q86UD0 394 aa5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 PRPF38AQ8NAV1 312 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 ZNF496Q96IT1 587 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 ZFP69BQ9UJL9 534 aa5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 APOBEC2Q9Y235 224 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-204ENST00000505804 hCG_2014768A0A024R1R8 64 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 A0A1B0GTL3 188 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 FFAR3O14843 346 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 NUAK1O60285 661 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 FBXO21O94952 628 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 CD40P25942 277 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 LSP1P33241 339 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 IL13P35225 146 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 ECE1P42892 770 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 IGBP1P78318 339 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 PHC1P78364 1004 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 FAM50AQ14320 339 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 LRRC32Q14392 662 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 VWA3BQ502W6 1294 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 PRR31Q5SQ13 230 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 IQSEC1Q6DN90 963 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 TTLL7Q6ZT98 887 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 NME9Q86XW9 330 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 ZZZ3Q8IYH5 903 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 ZNF610Q8N9Z0 462 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 CLRN3Q8NCR9 226 aa5.61□□□□□ -1.51
TOPBP1-204ENST00000505804 COG1Q8WTW3 980 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms