RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ADGRA3Q8IWK6 1321 aa6.73□□□□□ -1.33
GYPB-205ENST00000505583 FNDC1Q4ZHG4 1894 aaPredicted RBP6.73□□□□□ -1.33
GYPB-205ENST00000505583 PRR33A8MZF0 331 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 C5orf67F2Z3F1 127 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 ADAMTS3O15072 1205 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 DGKIO75912 1065 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 INSRRP14616 1297 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 CD52P31358 61 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 IRS1P35568 1242 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 SART3Q15020 963 aaKnown RBP6.72□□□□□ -1.33
GYPB-205ENST00000505583 XRRA1Q6P2D8 792 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 ADGRD2Q7Z7M1 963 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 NLRX1Q86UT6 975 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 SKAP1Q86WV1 359 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 GPIHBP1Q8IV16 184 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 CTCFLQ8NI51 663 aaPredicted RBP6.72□□□□□ -1.33
GYPB-205ENST00000505583 TMC2Q8TDI7 906 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 RUFY2Q8WXA3 655 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 SEPT1Q8WYJ6 367 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 APBB2Q92870 758 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 GLG1Q92896 1179 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 CLP1Q92989 425 aaKnown RBP6.72□□□□□ -1.33
GYPB-205ENST00000505583 CUL5Q93034 780 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 GPRASP2Q96D09 838 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 PGBD1Q96JS3 809 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 MAP3K14Q99558 947 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 LSG1Q9H089 658 aaKnown RBP6.72□□□□□ -1.33
GYPB-205ENST00000505583 FAM49AQ9H0Q0 323 aaPredicted RBP6.72□□□□□ -1.33
GYPB-205ENST00000505583 TMX1Q9H3N1 280 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 PSTPIP2Q9H939 334 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 ERAP1Q9NZ08 941 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 PCDHA6Q9UN73 950 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 PCDHGC5Q9Y5F6 944 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 PCDHA8Q9Y5H6 950 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 MRPL42Q9Y6G3 142 aaKnown RBP6.72□□□□□ -1.33
GYPB-205ENST00000505583 WDR81Q562E7 1941 aa6.72□□□□□ -1.33
GYPB-205ENST00000505583 EVPLQ92817 2033 aa6.71□□□□□ -1.33
GYPB-205ENST00000505583 C2orf72A6NCS6 295 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 SLC27A2O14975 620 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 MBTPS2O43462 519 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 CCNE2O96020 404 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 ARP10275 920 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 KIF5BP33176 963 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 MRPS6P82932 125 aaKnown RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 RBM10P98175 930 aaKnown RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 ITGB3BPQ13352 177 aaPredicted RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 MTMR1Q13613 665 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 BTG3Q14201 252 aaPredicted RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 PLCB4Q15147 1175 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 SMAD2Q15796 467 aaKnown RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 TMEM266Q2M3C6 531 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 PAN2Q504Q3 1202 aaKnown RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 TAF2Q6P1X5 1199 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 TMTC3Q6ZXV5 915 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 HEATR3Q7Z4Q2 680 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 GIMAP8Q8ND71 665 aaPredicted RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 TCEANC2Q96MN5 208 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 UIMC1Q96RL1 719 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 IGFLR1Q9H665 355 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 CDHR5Q9HBB8 845 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 JADE2Q9NQC1 790 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 KCNH7Q9NS40 1196 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 HCSTQ9UBK5 93 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 SEC63Q9UGP8 760 aaKnown RBP6.71□□□□□ -1.34
GYPB-205ENST00000505583 PADI3Q9ULW8 664 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
GYPB-205ENST00000505583 CCDC69A6NI79 296 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 DCXO43602 365 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 MGEA5O60502 916 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 SEC24BO95487 1268 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 GLP2RO95838 553 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 MMP1P03956 469 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 ITGB1P05556 798 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 RB1P06400 928 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 ALADP13716 330 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 MCM5P33992 734 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 LIFRP42702 1097 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 ACTR2P61160 394 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 FUT2Q10981 343 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 ADAM15Q13444 863 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 NECTIN1Q15223 517 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 PUS10Q3MIT2 529 aaKnown RBP6.7□□□□□ -1.34
GYPB-205ENST00000505583 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 WWC2Q6AWC2 1192 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 CASC1Q6TDU7 716 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 NFXL1Q6ZNB6 911 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 HFE2Q6ZVN8 426 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 ALYREFQ86V81 257 aaKnown RBP6.7□□□□□ -1.34
GYPB-205ENST00000505583 MICU3Q86XE3 530 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 ADHFE1Q8IWW8 467 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 KLHL23Q8NBE8 558 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 SPPL3Q8TCT6 385 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 TMEM40Q8WWA1 233 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 TMEM87BQ96K49 555 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 MSLNLQ96KJ4 702 aa6.7□□□□□ -1.34
GYPB-205ENST00000505583 MXRA8Q9BRK3 442 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms