RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MORC3Q14149 939 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCBP2Q15366 365 aaKnown RBP eCLIP4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZNF174Q15697 407 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 HSP90AB4PQ58FF6 505 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 BROXQ5VW32 411 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 OTOP1Q7RTM1 612 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 USP33Q8TEY7 942 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 TTC17Q96AE7 1141 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 HSPBAP1Q96EW2 488 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 AIFM3Q96NN9 605 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 UBA5Q9GZZ9 404 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 ADAM7Q9H2U9 754 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 IPPKQ9H8X2 491 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 VTA1Q9NP79 307 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 USP25Q9UHP3 1055 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCDHA2Q9Y5H9 948 aa4.96□□□□□ -1.62
TRAPPC13-208ENST00000505553 ADAMTS20P59510 1910 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 TRIM75PA6NK02 468 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 HMGB1P1B2RPK0 211 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZNF205O95201 554 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 LCP1P13796 627 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 LSP1P33241 339 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 PCBP3P57721 371 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 LACTBP83111 547 aaPredicted RBP4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 LSAMPQ13449 338 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 GBX1Q14549 363 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 DHX8Q14562 1220 aaKnown RBP4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZNF827Q17R98 1081 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 HHIPL2Q6UWX4 724 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 RASSF3Q86WH2 238 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 PJA1Q8NG27 643 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 CHAMP1Q96JM3 812 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 BOCQ9BWV1 1114 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 SIRT5Q9NXA8 310 aa4.95□□□□□ -1.62
TRAPPC13-208ENST00000505553 SLC12A8A0AV02 714 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 SHISA3A0PJX4 238 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 ANO9A1A5B4 782 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 KLHL33A6NCF5 533 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 OR14I1A6ND48 311 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 FZD9O00144 591 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 TBC1D8O95759 1140 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 IL33O95760 270 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 HSPA6P17066 643 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 RPL11P62913 178 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 PHC1P78364 1004 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 ARHGAP29Q52LW3 1261 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 GPR158Q5T848 1215 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 EFCAB2Q5VUJ9 269 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 C11orf96Q7Z7L8 435 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 CMTR2Q8IYT2 770 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 CISD2Q8N5K1 135 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 ANKS4BQ8N8V4 417 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 LINC00116Q8NCU8 138 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 MAN1C1Q9NR34 630 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 GPR160Q9UJ42 338 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 ZBTB21Q9ULJ3 1066 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 NOC2LQ9Y3T9 749 aaKnown RBP4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 SPO11Q9Y5K1 396 aa4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 TIMM13Q9Y5L4 95 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC13-208ENST00000505553 GOLGA8AA7E2F4 631 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 GOLGA8BA8MQT2 603 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 K7ESM1 405 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 HRKO00198 91 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 XPOTO43592 962 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 SYPP08247 313 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 LPOP22079 712 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 SRSF3P84103 164 aaKnown RBP4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 LRRC32Q14392 662 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 SAFBQ15424 915 aaKnown RBP eCLIP4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 TERF2Q15554 542 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 CYP2R1Q6VVX0 501 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 EP400NLQ6ZTU2 488 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 EPM2AIP1Q7L775 607 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 SYT8Q8NBV8 401 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 PTCHD1Q96NR3 888 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 ARPC5LQ9BPX5 153 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 NMRK2Q9NPI5 230 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 C1orf112Q9NSG2 853 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 H2AFY2Q9P0M6 372 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 CBLCQ9ULV8 474 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 INVSQ9Y283 1065 aa4.93□□□□□ -1.62
TRAPPC13-208ENST00000505553 FRMPD2Q68DX3 1309 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 H7BY64 318 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 FGF10O15520 208 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 TGM5O43548 720 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 NPHS1O60500 1241 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 KRT37O76014 449 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 FOSP01100 380 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 PDE6AP16499 860 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 AKAP5P24588 427 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 SCAND1P57086 179 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 TEKQ02763 1124 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 SPIRE1Q08AE8 756 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 GPR19Q15760 415 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 INF2Q27J81 1249 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 TIGD5Q53EQ6 642 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 COBLL1Q53SF7 1204 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 RTP2Q5QGT7 225 aa4.92□□□□□ -1.62
TRAPPC13-208ENST00000505553 CREB3L3Q68CJ9 461 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms