RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 EPOPA6NHQ4 379 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 H3BQV1 296 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 RFXAPO00287 272 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 PSMD10O75832 226 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 TAP1Q03518 808 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 MFSD10Q14728 455 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 HERC6Q8IVU3 1022 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 CAGE1Q8TC20 777 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 NECAB3Q96P71 396 aaPredicted RBP19.04■□□□□ 0.64
SYNE4-207ENST00000505054 PCYT2Q99447 389 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 RIT2Q99578 217 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 CERS4Q9HA82 394 aa19.04■□□□□ 0.64
SYNE4-207ENST00000505054 EMSYQ7Z589 1322 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 SIP14410 1827 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 H3BRB1 525 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 GAS7O60861 476 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 LGR5O75473 907 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 ATG7O95352 703 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 KCNQ1P51787 676 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 CHMP4BP1P59074 171 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 KIAA0753Q2KHM9 967 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 LRCH2Q5VUJ6 765 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 MCTP1Q6DN14 999 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 AFAP1L1Q8TED9 768 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 HAS1Q92839 578 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 KATNAL1Q9BW62 490 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 TUT1Q9H6E5 874 aaKnown RBP19.03■□□□□ 0.64
SYNE4-207ENST00000505054 RAPGEFL1Q9UHV5 662 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 COG5Q9UP83 839 aa19.03■□□□□ 0.64
SYNE4-207ENST00000505054 ARHGEF15O94989 841 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 ATP2B1P20020 1258 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 KCNJ6P48051 423 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 KRT76Q01546 638 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 PTGISQ16647 500 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 ZNF746Q6NUN9 644 aaPredicted RBP19.02■□□□□ 0.64
SYNE4-207ENST00000505054 B3GNT9Q6UX72 402 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 ABHD15Q6UXT9 468 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 SESTD1Q86VW0 696 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 ARNTL2Q8WYA1 636 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 TEKT3Q9BXF9 490 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 UNC45AQ9H3U1 944 aa19.02■□□□□ 0.64
SYNE4-207ENST00000505054 IGKV6D-21A0A0A0MT36 114 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 TBX3O15119 743 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 PDCP20941 246 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 SYT1P21579 422 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 TRAPPC10P48553 1259 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 TOB1P50616 345 aaPredicted RBP19.01■□□□□ 0.63
SYNE4-207ENST00000505054 RBL2Q08999 1139 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 NBR1Q14596 966 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 FAM20AQ96MK3 541 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 C1QTNF1Q9BXJ1 281 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 HDAC6Q9UBN7 1215 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 VAV3Q9UKW4 847 aa19.01■□□□□ 0.63
SYNE4-207ENST00000505054 ZNF215Q9UL58 517 aaPredicted RBP19.01■□□□□ 0.63
SYNE4-207ENST00000505054 VPS37CA5D8V6 355 aaPredicted RBP19■□□□□ 0.63
SYNE4-207ENST00000505054 CHMP2AO43633 222 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 TLL1O43897 1013 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 NEMFO60524 1076 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
SYNE4-207ENST00000505054 MCM7P33993 719 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 WDR5P61964 334 aaKnown RBP19■□□□□ 0.63
SYNE4-207ENST00000505054 TTC38Q5R3I4 469 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 CCDC60Q8IWA6 550 aaPredicted RBP19■□□□□ 0.63
SYNE4-207ENST00000505054 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
SYNE4-207ENST00000505054 GLG1Q92896 1179 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 CTAGE1Q96RT6 745 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 TMEM60Q9H2L4 133 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 SMARCAD1Q9H4L7 1026 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 TCEAL9Q9UHQ7 104 aa19■□□□□ 0.63
SYNE4-207ENST00000505054 NOL7Q9UMY1 257 aaKnown RBP19■□□□□ 0.63
SYNE4-207ENST00000505054 WDR64B1ANS9 1081 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 SMIM10L2AP0DMW4 78 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 SMIM10L2BP0DMW5 78 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 SELPP16109 830 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 PLA2G5P39877 138 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 GRB10Q13322 594 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 HIC1Q14526 733 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 ZNF174Q15697 407 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 CALCRLQ16602 461 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 GDF6Q6KF10 455 aaPredicted RBP18.99■□□□□ 0.63
SYNE4-207ENST00000505054 MIS18BP1Q6P0N0 1132 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 LRRC8DQ7L1W4 858 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 C7orf31Q8N865 590 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 MTMR9Q96QG7 549 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 RNPEPQ9H4A4 650 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 ERAP1Q9NZ08 941 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 GTF2IRD1Q9UHL9 959 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 PCDHA10Q9Y5I2 948 aa18.99■□□□□ 0.63
SYNE4-207ENST00000505054 HSP90AA1P07900 732 aaKnown RBP18.98■□□□□ 0.63
SYNE4-207ENST00000505054 MARK3P27448 753 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 HOXC8P31273 242 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 STAT5BP51692 787 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 SPIRE1Q08AE8 756 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 PPP2R5CQ13362 524 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 ORC2Q13416 577 aaPredicted RBP18.98■□□□□ 0.63
SYNE4-207ENST00000505054 CNKSR3Q6P9H4 555 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 PLPPR4Q7Z2D5 763 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 FERMT3Q86UX7 667 aa18.98■□□□□ 0.63
SYNE4-207ENST00000505054 DHX38Q92620 1227 aaKnown RBP18.98■□□□□ 0.63
SYNE4-207ENST00000505054 HLA-CQ95604 372 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms