RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 BICDL2A1A5D9 508 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 DDX39AO00148 427 aaKnown RBP11.27□□□□□ -0.61
DDX41-203ENST00000504781 COBLO75128 1261 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 CCNE2O96020 404 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 SSBP05455 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX41-203ENST00000504781 KRT18P05783 430 aaKnown RBP11.27□□□□□ -0.61
DDX41-203ENST00000504781 IDEP14735 1019 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
DDX41-203ENST00000504781 GAP43P17677 238 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 GUCY2CP25092 1073 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 SP2Q02086 613 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 STK4Q13043 487 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 SLC9C1Q4G0N8 1177 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
DDX41-203ENST00000504781 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
DDX41-203ENST00000504781 GUF1Q8N442 669 aaKnown RBP11.27□□□□□ -0.61
DDX41-203ENST00000504781 SEPT1Q8WYJ6 367 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 ATP6V0A1Q93050 837 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 LXNQ9BS40 222 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 ARHGAP39Q9C0H5 1083 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 VTA1Q9NP79 307 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 FANCLQ9NW38 375 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 SEL1LQ9UBV2 794 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
DDX41-203ENST00000504781 ODF2LQ9ULJ1 636 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 PTCH2Q9Y6C5 1203 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 ADGRA2Q96PE1 1338 aa11.27□□□□□ -0.61
DDX41-203ENST00000504781 ARHGEF35A5YM69 484 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 ADCY5O95622 1261 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 FGFR1OPO95684 399 aaKnown RBP11.26□□□□□ -0.61
DDX41-203ENST00000504781 CDK11BP21127 795 aaKnown RBP11.26□□□□□ -0.61
DDX41-203ENST00000504781 CCNE1P24864 410 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 ACTR2P61160 394 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 PAK1Q13153 545 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 TTLL4Q14679 1199 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 CELF3Q5SZQ8 465 aaKnown RBP11.26□□□□□ -0.61
DDX41-203ENST00000504781 MORN1Q5T089 497 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 IQSEC1Q6DN90 963 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 CENPPQ6IPU0 288 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 SWSAP1Q6NVH7 229 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 CCDC62Q6P9F0 684 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 METTL7BQ6UX53 244 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 PIGOQ8TEQ8 1089 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 NOC3LQ8WTT2 800 aaKnown RBP11.26□□□□□ -0.61
DDX41-203ENST00000504781 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 TRIM5Q9C035 493 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 NRBP2Q9NSY0 501 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 MAFBQ9Y5Q3 323 aaPredicted RBP11.26□□□□□ -0.61
DDX41-203ENST00000504781 LCTP09848 1927 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 LOXHD1Q8IVV2 1947 aa11.26□□□□□ -0.61
DDX41-203ENST00000504781 HOXC6P09630 235 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 SUPT20HL2P0C7V6 817 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 MAPTP10636 758 aaKnown RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 EN2P19622 333 aaPredicted RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 CDC25BP30305 580 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 YWHABP31946 246 aaKnown RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 RARRES1P49788 294 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 LACTBP83111 547 aaPredicted RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 COASYQ13057 564 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 LAMC2Q13753 1193 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 TPD52L1Q16890 204 aaPredicted RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 HS1BP3Q53T59 392 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 XKR3Q5GH77 459 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 CYFIP1Q7L576 1253 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 EXOC8Q8IYI6 725 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 AFAP1L1Q8TED9 768 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 NELFBQ8WX92 580 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 P2RX5Q93086 422 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 MRFAP1L1Q96HT8 127 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 MED15Q96RN5 788 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 CTAGE1Q96RT6 745 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 NIFKQ9BYG3 293 aaKnown RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 HSD3B7Q9H2F3 369 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 ABHD16BQ9H3Z7 469 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 SLC39A2Q9NP94 309 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 WRAP73Q9P2S5 460 aaPredicted RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 GABBR1Q9UBS5 961 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 GDAQ9Y2T3 454 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 NFE2L3Q9Y4A8 694 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 PPME1Q9Y570 386 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 PCDHA2Q9Y5H9 948 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 SYNGAP1Q96PV0 1343 aa11.25□□□□□ -0.61
DDX41-203ENST00000504781 TNRC18O15417 2968 aaPredicted RBP11.25□□□□□ -0.61
DDX41-203ENST00000504781 GSTTP1A0A1W2PQM5 241 aa11.24□□□□□ -0.61
DDX41-203ENST00000504781 ZBTB39O15060 712 aa11.24□□□□□ -0.61
DDX41-203ENST00000504781 NKRFO15226 690 aaKnown RBP eCLIP11.24□□□□□ -0.61
DDX41-203ENST00000504781 AP5Z1O43299 807 aa11.24□□□□□ -0.61
DDX41-203ENST00000504781 CBFA2T2O43439 604 aa11.24□□□□□ -0.61
DDX41-203ENST00000504781 FARP2O94887 1054 aaPredicted RBP11.24□□□□□ -0.61
DDX41-203ENST00000504781 STBD1O95210 358 aa11.24□□□□□ -0.61
DDX41-203ENST00000504781 TPM3P06753 285 aa11.24□□□□□ -0.61
DDX41-203ENST00000504781 TXNP10599 105 aaKnown RBP11.24□□□□□ -0.61
DDX41-203ENST00000504781 ZNF18P17022 549 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms