RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 RUFY4Q6ZNE9 571 aa23.92■■□□□ 1.42
TRAPPC11-203ENST00000504526 CKAP2LQ8IYA6 745 aa23.92■■□□□ 1.42
TRAPPC11-203ENST00000504526 ETNPPLQ8TBG4 499 aa23.92■■□□□ 1.42
TRAPPC11-203ENST00000504526 BBXQ8WY36 941 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC11-203ENST00000504526 TTYH1Q9H313 450 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC11-203ENST00000504526 PCDHA2Q9Y5H9 948 aa23.92■■□□□ 1.42
TRAPPC11-203ENST00000504526 PCDHA11Q9Y5I1 949 aa23.92■■□□□ 1.42
TRAPPC11-203ENST00000504526 PBX2P40425 430 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 PLEKHG4Q58EX7 1191 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 KRT40Q6A162 431 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 SEPT8Q92599 483 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 TNFRSF25Q93038 417 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 FAM167AQ96KS9 214 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 FAM20AQ96MK3 541 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 FAM161BQ96MY7 647 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 ZNF576Q9H609 170 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 GABBR1Q9UBS5 961 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 STXBP5LQ9Y2K9 1186 aa23.91■■□□□ 1.42
TRAPPC11-203ENST00000504526 IGSF9BQ9UPX0 1349 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 WDR5P61964 334 aaKnown RBP23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 NR5A1Q13285 461 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 DIS3L2Q8IYB7 885 aaKnown RBP23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 NME8Q8N427 588 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 DBF4BQ8NFT6 615 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 DNAJB3Q8WWF6 145 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 APBB2Q92870 758 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 UNC45AQ9H3U1 944 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 CEP131Q9UPN4 1083 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 TET1Q8NFU7 2136 aa23.9■■□□□ 1.42
TRAPPC11-203ENST00000504526 SMIM35A0A1B0GVV1 85 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 KIF28PB7ZC32 967 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 TBX3O15119 743 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 CHMP2AO43633 222 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 CCNT1O60563 726 aaKnown RBP23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 ATP4AP20648 1035 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 SAFBQ15424 915 aaKnown RBP eCLIP23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 IER5Q5VY09 327 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 MTHFD1LQ6UB35 978 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 GUCD1Q96NT3 240 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 SLC28A3Q9HAS3 691 aa23.89■■□□□ 1.41
TRAPPC11-203ENST00000504526 M0QZ92 97 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 SLC37A4O43826 429 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 CHRNA1P02708 482 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 KLRC1P26715 233 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 MGAT3Q09327 533 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 B3GNT9Q6UX72 402 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 MIER3Q7Z3K6 550 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 HERC6Q8IVU3 1022 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 FAM184AQ8NB25 1140 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 TRAPPC12Q8WVT3 735 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 TBC1D32Q96NH3 1257 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 KCNMB3Q9NPA1 279 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 NRBP2Q9NSY0 501 aa23.88■■□□□ 1.41
TRAPPC11-203ENST00000504526 BTBD18B2RXH4 712 aa23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 RABGGTBP53611 331 aa23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 MRPS6P82932 125 aaKnown RBP23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 EARS2Q5JPH6 523 aaKnown RBP23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 GJA10Q969M2 543 aa23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 C8orf76Q96K31 380 aa23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 CDX2Q99626 313 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 FAM49AQ9H0Q0 323 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 NKX2-4Q9H2Z4 354 aa23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 YBX2Q9Y2T7 364 aaKnown RBP23.87■■□□□ 1.41
TRAPPC11-203ENST00000504526 MARCH6O60337 910 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 OATP04181 439 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 MCM2P49736 904 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 FOSBP53539 338 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 TCTN1Q2MV58 587 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 USP38Q8NB14 1042 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 IFIH1Q9BYX4 1025 aaKnown RBP23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 CDY2AQ9Y6F7 541 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 SQORQ9Y6N5 450 aa23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 LAMA2P24043 3122 aaKnown RBP23.86■■□□□ 1.41
TRAPPC11-203ENST00000504526 MAGEB2O15479 319 aa23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 BAG4O95429 457 aaKnown RBP23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 AMHP03971 560 aa23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 PRKCEQ02156 737 aa23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 PPP2R5CQ13362 524 aa23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 SLFN12Q8IYM2 578 aa23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 ZBTB10Q96DT7 871 aa23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 TRPV2Q9Y5S1 764 aa23.85■■□□□ 1.41
TRAPPC11-203ENST00000504526 ZBTB42B2RXF5 422 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 ZNF862O60290 1169 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 C22orf31O95567 290 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 GHRP10912 638 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 DEFB103AP81534 67 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 MKRN4PQ13434 485 aaPredicted RBP23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 ZBED2Q9BTP6 218 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 KIF3AQ9Y496 699 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 KDM3AQ9Y4C1 1321 aa23.84■■□□□ 1.41
TRAPPC11-203ENST00000504526 FAM205CA6NFA0 338 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 TLL1O43897 1013 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 DKC1O60832 514 aaKnown RBP eCLIP23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 LPIN1Q14693 890 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 GRIN2CQ14957 1233 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 FBXO47Q5MNV8 452 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 PPP2R2DQ66LE6 453 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 TSHZ1Q6ZSZ6 1077 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 FAM43BQ6ZT52 329 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 TRMT1LQ7Z2T5 733 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms