RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 NOC3LQ8WTT2 800 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 MAML3Q96JK9 1138 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 FAM167AQ96KS9 214 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CAPNS2Q96L46 248 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 TINF2Q9BSI4 451 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CFHR5Q9BXR6 569 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 AZI2Q9H6S1 392 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 GABBR1Q9UBS5 961 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 LCTP09848 1927 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 LOXHD1Q8IVV2 1947 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 SYNRGQ9UMZ2 1314 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 IGSF9BQ9UPX0 1349 aa9.03□□□□□ -0.96
TOPBP1-202ENST00000503338 IGKV6D-21A0A0A0MT36 114 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 PPP1R3GB7ZBB8 358 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 NOP56O00567 594 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 TNPO2O14787 897 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 CBFA2T2O43439 604 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 DGAT1O75907 488 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 FAM13AO94988 1023 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 GGPS1O95749 300 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 GH1P01241 217 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 TPM3P06753 285 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 TXNP10599 105 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 MAPTP10636 758 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 SCP2P22307 547 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 ABCD1P33897 745 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 PRCPP42785 496 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 RARRES1P49788 294 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 PSMC6P62333 389 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 SP2Q02086 613 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 LRRC63Q05C16 580 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 ALCAMQ13740 583 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 KIF22Q14807 665 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 ARSHQ5FYA8 562 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 IQSEC1Q6DN90 963 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 SWSAP1Q6NVH7 229 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 CCDC62Q6P9F0 684 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 DHX37Q8IY37 1157 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 TRMT44Q8IYL2 757 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 PIGOQ8TEQ8 1089 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 NELFBQ8WX92 580 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 EMID1Q96A84 441 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 DRC1Q96MC2 740 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 CTAGE1Q96RT6 745 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 APBA2Q99767 749 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 TSG101Q99816 390 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 C17orf75Q9HAS0 396 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 PARVGQ9HBI0 331 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 ZNF302Q9NR11 478 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 OLFML3Q9NRN5 406 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 NRBP2Q9NSY0 501 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 LARSQ9P2J5 1176 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 NRBP1Q9UHY1 535 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 NFE2L3Q9Y4A8 694 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 UBE4BO95155 1302 aa9.02□□□□□ -0.97
TOPBP1-202ENST00000503338 A0A087WWV3 80 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 GOLGA6L6A8MZA4 724 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 EIF3DO15371 548 aaKnown RBP eCLIP9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 GAS2O43903 313 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 XRCC5P13010 732 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 CCNE1P24864 410 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 HOXD10P28358 340 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 STAT5BP51692 787 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 ZNF131P52739 623 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 PLCB2Q00722 1185 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 PRKCEQ02156 737 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 STK4Q13043 487 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 GRM1Q13255 1194 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 NCAPHQ15003 741 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 ARHGEF6Q15052 776 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 LY6KQ17RY6 165 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 KLHL10Q6JEL2 608 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 EEPD1Q7L9B9 569 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 PLPPR4Q7Z2D5 763 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 FAM114A1Q8IWE2 563 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 FBXO16Q8IX29 292 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 MYOCDQ8IZQ8 938 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 MCPH1Q8NEM0 835 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 PPTC7Q8NI37 304 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 USP6NLQ92738 828 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 KIFAP3Q92845 792 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 P2RX5Q93086 422 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 PDLIM2Q96JY6 352 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 SPATA33Q96N06 139 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 PPP1R9BQ96SB3 815 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 JPH2Q9BR39 696 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 REEP2Q9BRK0 252 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 TRIM5Q9C035 493 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 R3HDMLQ9H3Y0 253 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 WRAP73Q9P2S5 460 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 GDAQ9Y2T3 454 aa9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 ZNFX1Q9P2E3 1918 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-202ENST00000503338 EMSYQ7Z589 1322 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms