RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CCDC83Q8IWF9 413 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 NSMCE1Q8WV22 266 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 SCG3Q8WXD2 468 aaKnown RBP7.09□□□□□ -1.27
CLCN3-203ENST00000502998 LPIN2Q92539 896 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 P3H4Q92791 437 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 SLC39A13Q96H72 371 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 MAELQ96JY0 434 aaKnown RBP7.09□□□□□ -1.27
CLCN3-203ENST00000502998 CCDC42Q96M95 316 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 AIFM2Q9BRQ8 373 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 TTPALQ9BTX7 342 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 PLVAPQ9BX97 442 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 OSBPL3Q9H4L5 887 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 CCSER2Q9H7U1 834 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 BRD9Q9H8M2 597 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 C12orf10Q9HB07 376 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 CYP4F11Q9HBI6 524 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 PCDH12Q9NPG4 1184 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 NDFIP2Q9NV92 336 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 PIH1D1Q9NWS0 290 aaKnown RBP7.09□□□□□ -1.27
CLCN3-203ENST00000502998 ZNF69Q9UC07 566 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 ZC3H7BQ9UGR2 993 aaKnown RBP7.09□□□□□ -1.27
CLCN3-203ENST00000502998 SNX5Q9Y5X3 404 aa7.09□□□□□ -1.27
CLCN3-203ENST00000502998 UBN2Q6ZU65 1347 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 IGSF1Q8N6C5 1336 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 LOC105371267A0A1B0GV96 52 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 A0A1B0GVG6 124 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PRSS47A8MTI9 375 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 GNAT3A8MTJ3 354 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 BIN1O00499 593 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 MCF2LO15068 1137 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 GNPATO15228 680 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 SULT1B1O43704 296 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 STRNO43815 780 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 BUB1BO60566 1050 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 GSTA2P09210 222 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NCAM1P13591 858 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 CPA3P15088 417 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PHKG2P15735 406 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PORP16435 677 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PRKACBP22694 351 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 CDC25BP30305 580 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 STAT3P40763 770 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 THOP1P52888 689 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PLOD1Q02809 727 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NIPAL4Q0D2K0 466 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 MTMR3Q13615 1198 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 MOGSQ13724 837 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 ANKDD1AQ495B1 522 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PDCD4Q53EL6 469 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 ZC3H12BQ5HYM0 836 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 HYIQ5T013 277 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 IL23RQ5VWK5 629 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 TBC1D9BQ66K14 1250 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 INTS3Q68E01 1043 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PRPF40BQ6NWY9 871 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NEK5Q6P3R8 708 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 CYB5D1Q6P9G0 228 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PPP1R21Q6ZMI0 780 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 C14orf80Q86SX3 495 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 CCDC13Q8IYE1 715 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 IFNL2Q8IZJ0 200 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NPLOC4Q8TAT6 608 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NELL1Q92832 810 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 MED30Q96HR3 178 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 CATSPER2Q96P56 530 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 ALPK1Q96QP1 1244 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 FNBP1Q96RU3 617 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NAA15Q9BXJ9 866 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NIFKQ9BYG3 293 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 FAM117AQ9C073 453 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 FAM192AQ9GZU8 254 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 MIS12Q9H081 205 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 SMARCAD1Q9H4L7 1026 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 VIPAS39Q9H9C1 493 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 POLMQ9NP87 494 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 SH3GLB2Q9NR46 395 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PPP1R14DQ9NXH3 145 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 TMOD3Q9NYL9 352 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 NOP53Q9NZM5 478 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 CRNNQ9UBG3 495 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 MTRF1LQ9UGC7 380 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 HERC5Q9UII4 1024 aaKnown RBP7.08□□□□□ -1.28
CLCN3-203ENST00000502998 ATP6V1DQ9Y5K8 247 aa7.08□□□□□ -1.28
CLCN3-203ENST00000502998 PHLPP2Q6ZVD8 1323 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 LOC102724428A0A0B4J2F2 783 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 SRRM3A6NNA2 597 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CCDC169A6NNP5 214 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 BHMG1C9JSJ3 638 aaPredicted RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 AP3B1O00203 1094 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 LCA5LO95447 670 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CLTAP09496 248 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 NUDT7P0C024 238 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 PTPN2P17706 415 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CES1P23141 567 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 IL32P24001 234 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 PSMA4P25789 261 aaKnown RBP7.07□□□□□ -1.28
CLCN3-203ENST00000502998 ANXA13P27216 316 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 CCT5P48643 541 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 PDE6CP51160 858 aa7.07□□□□□ -1.28
CLCN3-203ENST00000502998 RCAN1P53805 252 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms