RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 RAD17O75943 681 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 TUBB8Q3ZCM7 444 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 SLFN13Q68D06 897 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 CCDC17Q96LX7 622 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 KRT12Q99456 494 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 ANO3Q9BYT9 981 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 TSKSQ9UJT2 592 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 CAPN7Q9Y6W3 813 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 SCN9AQ15858 1988 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 SIPA1L1O43166 1804 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 KDM3AQ9Y4C1 1321 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 TLR2O60603 784 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 CERKLQ49MI3 558 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-206ENST00000498614 CCDC40Q4G0X9 1142 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 SWT1Q5T5J6 900 aaKnown RBP17.97■□□□□ 0.47
COL6A1-206ENST00000498614 CNPY4Q8N129 248 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 PSMD1Q99460 953 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 NT5C3AQ9H0P0 336 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 BMP2KQ9NSY1 1161 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-206ENST00000498614 COL4A5P29400 1685 aa17.97■□□□□ 0.47
COL6A1-206ENST00000498614 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
COL6A1-206ENST00000498614 RBAK-RBAKDNI3L0D1 243 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 FNTAP49354 379 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 RNASE9P60153 205 aaKnown RBP17.96■□□□□ 0.47
COL6A1-206ENST00000498614 ZCWPW2Q504Y3 356 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 GPBP1Q86WP2 473 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 SUPT20HQ8NEM7 779 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 EPN3Q9H201 632 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 RNF14Q9UBS8 474 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 PACSIN2Q9UNF0 486 aaPredicted RBP17.96■□□□□ 0.47
COL6A1-206ENST00000498614 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 PRELPP51888 382 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 FKBP3Q00688 224 aaKnown RBP17.96■□□□□ 0.47
COL6A1-206ENST00000498614 SEPT2Q15019 361 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 HYIQ5T013 277 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 MREGQ8N565 214 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 OTUD6BQ8N6M0 293 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 TAOK3Q9H2K8 898 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 KANSL2Q9H9L4 492 aa17.96■□□□□ 0.47
COL6A1-206ENST00000498614 MYO1FO00160 1098 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 MEFVO15553 781 aaPredicted RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 MED24O75448 989 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 NOL4O94818 638 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 TAL1P17542 331 aaPredicted RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 NR1D1P20393 614 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 NAA35Q5VZE5 725 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 SH3BP5LQ7L8J4 393 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 PRPF38AQ8NAV1 312 aaKnown RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 ZDHHC15Q96MV8 337 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 P2RX7Q99572 595 aaKnown RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 ZHX3Q9H4I2 956 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 KCNMB3Q9NPA1 279 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 FAM198AQ9UFP1 575 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 ATXN2Q99700 1313 aaKnown RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 KIAA0754O94854 1291 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 GDF11O95390 407 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 KLRC1P26715 233 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 NAB2Q15742 525 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 SLC9C1Q4G0N8 1177 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 HERC4Q5GLZ8 1057 aaPredicted RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 CD302Q8IX05 232 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 CCDC65Q8IXS2 484 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 DCAF4Q8WV16 495 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 NAP1L4Q99733 375 aaKnown RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 EDEM3Q9BZQ6 932 aa17.95■□□□□ 0.46
COL6A1-206ENST00000498614 GEMIN8Q9NWZ8 242 aaKnown RBP17.95■□□□□ 0.46
COL6A1-206ENST00000498614 POTEFA5A3E0 1075 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 MEIS2O14770 477 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 POTEIP0CG38 1075 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 MNAT1P51948 309 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 SEC24CP53992 1094 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 PTGISQ16647 500 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 USH1GQ495M9 461 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 POTEGQ6S5H5 508 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 POTEEQ6S8J3 1075 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 SIAH1Q8IUQ4 282 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 ZNF473Q8WTR7 871 aaKnown RBP17.94■□□□□ 0.46
COL6A1-206ENST00000498614 INPP4AQ96PE3 977 aaPredicted RBP17.94■□□□□ 0.46
COL6A1-206ENST00000498614 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 PCDHA2Q9Y5H9 948 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 PPP1R37O75864 691 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 SERPING1P05155 500 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 KRT18P05783 430 aaKnown RBP17.94■□□□□ 0.46
COL6A1-206ENST00000498614 CYP11B2P19099 503 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 USP11P51784 963 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 ICA1Q05084 483 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 FAM83BQ5T0W9 1011 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 MEI1Q5TIA1 1274 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 EMC10Q5UCC4 262 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 MKL1Q969V6 931 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 ATP6V1G3Q96LB4 118 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 NCAPGQ9BPX3 1015 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 CEP72Q9P209 647 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 PI4KBQ9UBF8 816 aa17.94■□□□□ 0.46
COL6A1-206ENST00000498614 ZBTB12Q9Y330 459 aaPredicted RBP17.94■□□□□ 0.46
COL6A1-206ENST00000498614 RAD51CO43502 376 aa17.93■□□□□ 0.46
COL6A1-206ENST00000498614 IKQ13123 557 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms