RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	RBM8A	Q9Y5S9	174 aa	Known RBP	6.26	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CYP46A1	Q9Y6A2	500 aa		6.26	□□□□□ -1.41
HMGXB4-208	ENST00000498325	MED23	Q9ULK4	1368 aa		6.26	□□□□□ -1.41
HMGXB4-208	ENST00000498325	UBE2Q2L	H0YL09	131 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SLC27A2	O14975	620 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ARNT	P27540	789 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ADD2	P35612	726 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	GRM2	Q14416	872 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SLC4A8	Q2Y0W8	1093 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CDKAL1	Q5VV42	579 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	TMED8	Q6PL24	325 aa	Predicted RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	UBE3D	Q7Z6J8	389 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	FBXO33	Q7Z6M2	555 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SP8	Q8IXZ3	490 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ZGPAT	Q8N5A5	531 aa	Known RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CD99L2	Q8TCZ2	262 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SHISA4	Q96DD7	197 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CCDC97	Q96F63	343 aa	Predicted RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	FAM84B	Q96KN1	310 aa	Predicted RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SEC62	Q99442	399 aa	Known RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PIH1D3	Q9NQM4	214 aa	Known RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	LRP2BP	Q9P2M1	347 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PALD1	Q9ULE6	856 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CSAD	Q9Y600	493 aa		6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PDS5A	Q29RF7	1337 aa	Known RBP	6.25	□□□□□ -1.41
HMGXB4-208	ENST00000498325	TAF1	P21675	1872 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325		H7C1D1	291 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SNAP23	O00161	211 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	HMGB1	P09429	215 aa	Known RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	HSPD1	P10809	573 aa	Known RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	GNAT2	P19087	354 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CAST	P20810	708 aa	Known RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	GYG1	P46976	350 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	RASGRF1	Q13972	1273 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ANKRD1	Q15327	319 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	VPS53	Q5VIR6	699 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	BLOC1S2	Q6QNY1	142 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PI16	Q6UXB8	463 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CCDC129	Q6ZRS4	1044 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	C15orf52	Q6ZUT6	534 aa	Known RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	RUFY3	Q7L099	469 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ZNF804A	Q7Z570	1209 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	MFSD4A	Q8N468	514 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	OSBP2	Q969R2	916 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	DCPS	Q96C86	337 aa	Known RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ZSCAN31	Q96LW9	406 aa	Predicted RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	JAKMIP1	Q96N16	626 aa	Known RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	GUCD1	Q96NT3	240 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ALPK1	Q96QP1	1244 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	EMILIN2	Q9BXX0	1053 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SLK	Q9H2G2	1235 aa	Predicted RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CWC22	Q9HCG8	908 aa	Known RBP	6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PDRG1	Q9NUG6	133 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PODXL2	Q9NZ53	605 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	CHMP5	Q9NZZ3	219 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ABCF2	Q9UG63	623 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	MAST3	O60307	1309 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	RPTOR	Q8N122	1335 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ZNF532	Q9HCE3	1301 aa		6.24	□□□□□ -1.41
HMGXB4-208	ENST00000498325		A0A1B0GUL6	1792 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	MYH7	P12883	1935 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	YDJC	A8MPS7	323 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325		H3BS24	57 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325		M0R2C6	588 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ZNF213	O14771	459 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	GPAA1	O43292	621 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	FOXD2	O60548	495 aa	Predicted RBP	6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	UFL1	O94874	794 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PDE6A	P16499	860 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	NTF4	P34130	210 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	FCGRT	P55899	365 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	GPSM2	P81274	684 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	IMMT	Q16891	758 aa	Known RBP	6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ARMCX6	Q7L4S7	300 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	UBE2Q1	Q7Z7E8	422 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	MAGEB6	Q8N7X4	407 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	WDR66	Q8TBY9	1149 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	NEK1	Q96PY6	1258 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	NACAP1	Q9BZK3	213 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PUS7L	Q9H0K6	701 aa	Known RBP	6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	DNAJC25	Q9H1X3	360 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ZCCHC4	Q9H5U6	513 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	RAI14	Q9P0K7	980 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SLAMF8	Q9P0V8	285 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	SERPINA10	Q9UK55	444 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	LIMCH1	Q9UPQ0	1083 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	ATP6V0A2	Q9Y487	856 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PTCH2	Q9Y6C5	1203 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	KIAA0100	Q14667	2235 aa	Known RBP	6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	EYS	Q5T1H1	3165 aa		6.23	□□□□□ -1.41
HMGXB4-208	ENST00000498325	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.22	□□□□□ -1.41
HMGXB4-208	ENST00000498325	TCRBV5S4A2T	A0A5A2	114 aa		6.22	□□□□□ -1.41
HMGXB4-208	ENST00000498325	DCDC2C	A8MYV0	355 aa		6.22	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PRR33	A8MZF0	331 aa		6.22	□□□□□ -1.41
HMGXB4-208	ENST00000498325	PATL2	C9JE40	543 aa	Known RBP	6.22	□□□□□ -1.41
HMGXB4-208	ENST00000498325	EIF1AY	O14602	144 aa	Known RBP	6.22	□□□□□ -1.41
HMGXB4-208	ENST00000498325	FANCG	O15287	622 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms