RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 KHSRPQ92945 711 aaKnown RBP eCLIP20.78■□□□□ 0.92
ATPAF2-209ENST00000497871 LRFN3Q9BTN0 628 aa20.78■□□□□ 0.92
ATPAF2-209ENST00000497871 CELF4Q9BZC1 486 aaKnown RBP20.78■□□□□ 0.92
ATPAF2-209ENST00000497871 TMEM260Q9NX78 707 aa20.78■□□□□ 0.92
ATPAF2-209ENST00000497871 TRPV2Q9Y5S1 764 aa20.78■□□□□ 0.92
ATPAF2-209ENST00000497871 IGKV6D-21A0A0A0MT36 114 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 SMIM35A0A1B0GVV1 85 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 POTEB3A0JP26 581 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 IL9P15248 144 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 CDC27P30260 824 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 POTEBQ6S5H4 581 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 MTHFD1LQ6UB35 978 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 FAM43BQ6ZT52 329 aaPredicted RBP20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 SKAP1Q86WV1 359 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 CRIPAKQ8N1N5 446 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 TRAPPC12Q8WVT3 735 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 PLVAPQ9BX97 442 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 PADI3Q9ULW8 664 aa20.77■□□□□ 0.92
ATPAF2-209ENST00000497871 CCDC196A0A1B0GTZ2 297 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 H3BQ06 376 aaPredicted RBP20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 GPR37L1O60883 481 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 CDC45O75419 566 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 TMEM62Q0P6H9 643 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 ABHD15Q6UXT9 468 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 LINC01599Q8WXQ3 324 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 IGSF9BQ9UPX0 1349 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 KDM3AQ9Y4C1 1321 aa20.76■□□□□ 0.91
ATPAF2-209ENST00000497871 GRM6O15303 877 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 HBP1O60381 514 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 CCNE2O96020 404 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 CYP3A4P08684 503 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 STAG3L1P0CL83 205 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 KLRC1P26715 233 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 ADD1P35611 737 aaKnown RBP20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 FGD1P98174 961 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 KRT76Q01546 638 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 PAK2Q13177 524 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 PFKFB3Q16875 520 aaPredicted RBP20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 FAM160B1Q5W0V3 765 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 MCTP2Q6DN12 878 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 EP400NLQ6ZTU2 488 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 PLA2G4DQ86XP0 818 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 NPAS4Q8IUM7 802 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 FAM50BQ9Y247 325 aa20.75■□□□□ 0.91
ATPAF2-209ENST00000497871 FAM86B1E9PN63 330 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 BACH1O14867 736 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 DHX15O43143 795 aaKnown RBP20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 FAM86B2P0C5J1 330 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 JAKMIP3Q5VZ66 844 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 CMTR2Q8IYT2 770 aaKnown RBP20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 ATP8B4Q8TF62 1192 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 CRYGNQ8WXF5 182 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 P2RX5Q93086 422 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 CLDND1Q9NY35 253 aa20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 NAP1L2Q9ULW6 460 aaPredicted RBP20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 ARIH1Q9Y4X5 557 aaPredicted RBP20.74■□□□□ 0.91
ATPAF2-209ENST00000497871 TTC3P53804 2025 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 ESYT2A0FGR8 921 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 DDX39AO00148 427 aaKnown RBP20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 SCG2P13521 617 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 SSTR3P32745 418 aaPredicted RBP20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 METAP2P50579 478 aaKnown RBP eCLIP20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 CTC1Q2NKJ3 1217 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 NAALADL2Q58DX5 795 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 MIS18BP1Q6P0N0 1132 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 KCNB2Q92953 911 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 ZMYND12Q9H0C1 365 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 ZNF302Q9NR11 478 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 PLAGL2Q9UPG8 496 aa20.73■□□□□ 0.91
ATPAF2-209ENST00000497871 IGLV3-22A0A075B6J6 115 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 IPO5O00410 1097 aaKnown RBP20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 MMP1P03956 469 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 LTBRP36941 435 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 PLA2G5P39877 138 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 ZNF484Q5JVG2 852 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 SWSAP1Q6NVH7 229 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 CCDC60Q8IWA6 550 aaPredicted RBP20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 KIAA0319LQ8IZA0 1049 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 CCDC12Q8WUD4 166 aaPredicted RBP20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 FAM122AQ96E09 287 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 C6orf50Q9HD87 102 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 ALG13Q9NP73 1137 aaKnown RBP20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 C11orf16Q9NQ32 467 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 TBC1D22BQ9NU19 505 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 PRKAG3Q9UGI9 489 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 MRPL42Q9Y6G3 142 aaKnown RBP20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 COL1A2P08123 1366 aa20.72■□□□□ 0.91
ATPAF2-209ENST00000497871 PRPF3O43395 683 aaKnown RBP20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 APOBRQ0VD83 1088 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 HYAL1Q12794 435 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 NFX1Q12986 1120 aaKnown RBP20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 PDXDC2PQ6P474 469 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 Q6ZUG5 572 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 FBXL16Q8N461 479 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 ZNF577Q9BSK1 485 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 TMX1Q9H3N1 280 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 HCN4Q9Y3Q4 1203 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 MYO7AQ13402 2215 aa20.71■□□□□ 0.91
ATPAF2-209ENST00000497871 ALADP13716 330 aa20.7■□□□□ 0.9
ATPAF2-209ENST00000497871 CPA1P15085 419 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms