RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 TECP42680 631 aa19■□□□□ 0.63
VIM-208ENST00000497849 TMEM62Q0P6H9 643 aa19■□□□□ 0.63
VIM-208ENST00000497849 IER5Q5VY09 327 aa19■□□□□ 0.63
VIM-208ENST00000497849 FRMD5Q7Z6J6 570 aa19■□□□□ 0.63
VIM-208ENST00000497849 UBAC1Q9BSL1 405 aa19■□□□□ 0.63
VIM-208ENST00000497849 SMOC2Q9H3U7 446 aa19■□□□□ 0.63
VIM-208ENST00000497849 HCSTQ9UBK5 93 aa19■□□□□ 0.63
VIM-208ENST00000497849 SORCS3Q9UPU3 1222 aa19■□□□□ 0.63
VIM-208ENST00000497849 PCDHB12Q9Y5F1 795 aa19■□□□□ 0.63
VIM-208ENST00000497849 TRPV2Q9Y5S1 764 aa19■□□□□ 0.63
VIM-208ENST00000497849 IGSF9BQ9UPX0 1349 aa19■□□□□ 0.63
VIM-208ENST00000497849 KCNA2P16389 499 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 MFAP1P55081 439 aaKnown RBP18.99■□□□□ 0.63
VIM-208ENST00000497849 IGBP1P78318 339 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 TRAF1Q13077 416 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 MTMR3Q13615 1198 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 PCNX4Q63HM2 1172 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 UBALD2Q8IYN6 164 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 RASGRP4Q8TDF6 673 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 SEPT1Q8WYJ6 367 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 NKD2Q969F2 451 aaPredicted RBP18.99■□□□□ 0.63
VIM-208ENST00000497849 LRFN2Q9ULH4 789 aa18.99■□□□□ 0.63
VIM-208ENST00000497849 DMXL1Q9Y485 3027 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 PNMA6FA0A0J9YX94 578 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 INSRRP14616 1297 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 SDSP20132 328 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 PAK2Q13177 524 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 ADSSL1Q8N142 457 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 GIMAP8Q8ND71 665 aaPredicted RBP18.98■□□□□ 0.63
VIM-208ENST00000497849 KRT23Q9C075 422 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 TMEM260Q9NX78 707 aa18.98■□□□□ 0.63
VIM-208ENST00000497849 C2CD4DB7Z1M9 353 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 MGEA5O60502 916 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 RPLP2P05387 115 aaKnown RBP18.97■□□□□ 0.63
VIM-208ENST00000497849 SRGAP2BP0DMP2 458 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 IBSPP21815 317 aaPredicted RBP18.97■□□□□ 0.63
VIM-208ENST00000497849 SARSP49591 514 aaKnown RBP18.97■□□□□ 0.63
VIM-208ENST00000497849 APOBRQ0VD83 1088 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 GRM4Q14833 912 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 TMEM266Q2M3C6 531 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 SPOUT1Q5T280 376 aaKnown RBP18.97■□□□□ 0.63
VIM-208ENST00000497849 FAM102BQ5T8I3 360 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 PDE12Q6L8Q7 609 aaKnown RBP18.97■□□□□ 0.63
VIM-208ENST00000497849 LLGL2Q6P1M3 1020 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 NLRX1Q86UT6 975 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 THNSL1Q8IYQ7 743 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 COLGALT1Q8NBJ5 622 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 GLG1Q92896 1179 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 RILPL2Q969X0 211 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 CELF4Q9BZC1 486 aaKnown RBP18.97■□□□□ 0.63
VIM-208ENST00000497849 SMARCAD1Q9H4L7 1026 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 TSHZ2Q9NRE2 1034 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 AAASQ9NRG9 546 aa18.97■□□□□ 0.63
VIM-208ENST00000497849 EP300Q09472 2414 aaPredicted RBP18.97■□□□□ 0.63
VIM-208ENST00000497849 TBKBP1A7MCY6 615 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 HIDE1A8MVS5 230 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 PLPP4Q5VZY2 271 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 ASTLQ6HA08 431 aaPredicted RBP18.96■□□□□ 0.63
VIM-208ENST00000497849 XRRA1Q6P2D8 792 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 USP17L6PQ6QN14 398 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 CYB5R4Q7L1T6 521 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 PCYT2Q99447 389 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 POMKQ9H5K3 350 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 TYW1Q9NV66 732 aaKnown RBP18.96■□□□□ 0.63
VIM-208ENST00000497849 NR2E1Q9Y466 385 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 PCDHB7Q9Y5E2 793 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 KDM3AQ9Y4C1 1321 aa18.96■□□□□ 0.63
VIM-208ENST00000497849 RRN3P2A6NIE6 340 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 M0QZ92 97 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 MEIS2O14770 477 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 HOXB8P17481 243 aaPredicted RBP18.95■□□□□ 0.62
VIM-208ENST00000497849 IMMTQ16891 758 aaKnown RBP18.95■□□□□ 0.62
VIM-208ENST00000497849 TRAPPC12Q8WVT3 735 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 GPRASP2Q96D09 838 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 CWH43Q9H720 699 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 CNNM2Q9H8M5 875 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
VIM-208ENST00000497849 LZTS1Q9Y250 596 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 PCDHA2Q9Y5H9 948 aa18.95■□□□□ 0.62
VIM-208ENST00000497849 ARP10275 920 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 ITGB5P18084 799 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 NFX1Q12986 1120 aaKnown RBP18.94■□□□□ 0.62
VIM-208ENST00000497849 MCTP2Q6DN12 878 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 CWC27Q6UX04 472 aaKnown RBP18.94■□□□□ 0.62
VIM-208ENST00000497849 SMARCC2Q8TAQ2 1214 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 MRPS27Q92552 414 aaKnown RBP18.94■□□□□ 0.62
VIM-208ENST00000497849 TCF25Q9BQ70 676 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 DSCC1Q9BVC3 393 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 SENP2Q9HC62 589 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 ERVK-5Q9HDB9 667 aa18.94■□□□□ 0.62
VIM-208ENST00000497849 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
VIM-208ENST00000497849 ASGR2P07307 311 aa18.93■□□□□ 0.62
VIM-208ENST00000497849 CLCN5P51795 746 aa18.93■□□□□ 0.62
VIM-208ENST00000497849 PLCB3Q01970 1234 aa18.93■□□□□ 0.62
VIM-208ENST00000497849 PIBF1Q8WXW3 757 aa18.93■□□□□ 0.62
VIM-208ENST00000497849 RGS18Q9NS28 235 aa18.93■□□□□ 0.62
VIM-208ENST00000497849 PKD2L1Q9P0L9 805 aa18.93■□□□□ 0.62
VIM-208ENST00000497849 CACNA1BQ00975 2339 aa18.92■□□□□ 0.62
VIM-208ENST00000497849 C9IYK1 514 aa18.92■□□□□ 0.62
VIM-208ENST00000497849 KRT76Q01546 638 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms