RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 LRRC55Q6ZSA7 311 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 HDXQ7Z353 690 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 SCYL3Q8IZE3 742 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 NOA1Q8NC60 698 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 GOLGA5Q8TBA6 731 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 FAXDC2Q96IV6 333 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 PANK4Q9NVE7 773 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 A0A1W2PQJ5 194 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 MEIS1O00470 390 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 MARSP56192 900 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 MIIPQ5JXC2 388 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 CCDC174Q6PII3 467 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 KRT26Q7Z3Y9 468 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 TTYH3Q9C0H2 523 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 L1RE1Q9UN81 338 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 RRP15Q9Y3B9 282 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 A0A0G2JMZ2 1700 aa12.74□□□□□ -0.37
SNRNP200-208ENST00000497539 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 CTAGE9A4FU28 777 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 E9PMD0 336 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 EYA4O95677 639 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 FAM26FQ5R3K3 315 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 OTOP1Q7RTM1 612 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 TMTC1Q8IUR5 882 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 MYOCDQ8IZQ8 938 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 NEK9Q8TD19 979 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 GJA10Q969M2 543 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 CEP63Q96MT8 703 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 RIT2Q99578 217 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 HINFPQ9BQA5 517 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 TUBGCP2Q9BSJ2 902 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 VPS16Q9H269 839 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 AS3MTQ9HBK9 375 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 SLC39A2Q9NP94 309 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 ABHD10Q9NUJ1 306 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 TRIM10Q9UDY6 481 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 CAPN11Q9UMQ6 739 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 TFR2Q9UP52 801 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 CAND2O75155 1236 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 STAT3P40763 770 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 BMT2Q1RMZ1 405 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 ARSHQ5FYA8 562 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 MMS22LQ6ZRQ5 1243 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 GPBP1Q86WP2 473 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 CEP112Q8N8E3 955 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 TSG101Q99816 390 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 WDR11Q9BZH6 1224 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 NUB1Q9Y5A7 615 aa12.73□□□□□ -0.37
SNRNP200-208ENST00000497539 TAL1P17542 331 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 OAZ1P54368 228 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 UBXN1Q04323 297 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 CASP8Q14790 479 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 LEKR1Q6ZMV7 388 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 EPM2AIP1Q7L775 607 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 DYMQ7RTS9 669 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 GPC2Q8N158 579 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 EMILIN3Q9NT22 766 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 FBXO28Q9NVF7 368 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 KCND2Q9NZV8 630 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 CCPG1Q9ULG6 757 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 DNM3Q9UQ16 869 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 ENC1O14682 589 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 CPP00450 1065 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 CFBP00751 764 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 ZNF76P36508 570 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 ERVK-24P63145 666 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 EDRF1Q3B7T1 1238 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 EIF2AK1Q9BQI3 630 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 MXRA8Q9BRK3 442 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 GPRC5DQ9NZD1 345 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
SNRNP200-208ENST00000497539 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 GNA14O95837 355 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 POTEIP0CG38 1075 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 VCAM1P19320 739 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 CDK17Q00537 523 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 GIT2Q14161 759 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 ZRSR2Q15696 482 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 MEA1Q16626 185 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 POTEGQ6S5H5 508 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 TBC1D5Q92609 795 aa12.71□□□□□ -0.37
SNRNP200-208ENST00000497539 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms