RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 B4GALT6Q9UBX8 382 aa7.05□□□□□ -1.28
SNX13-211ENST00000496855 FAM83GA6ND36 823 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 MROH6A6NGR9 719 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 RASSF10A6NK89 507 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 KRT37O76014 449 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 POU3F2P20265 443 aaPredicted RBP7.04□□□□□ -1.28
SNX13-211ENST00000496855 MC4RP32245 332 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 KIAA2012Q0VF49 1180 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 TMEM132BQ14DG7 1078 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 DDX1Q92499 740 aaKnown RBP7.04□□□□□ -1.28
SNX13-211ENST00000496855 MFSD3Q96ES6 412 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 GBP4Q96PP9 640 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 ORAI3Q9BRQ5 295 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 GALNT8Q9NY28 637 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 RTEL1Q9NZ71 1219 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 KPNA6O60684 536 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 KLHL18O94889 574 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 MPIG6BO95866 241 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 NEK4P51957 841 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 CATSPEREQ5SY80 951 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 CC2D1AQ6P1N0 951 aaPredicted RBP7.04□□□□□ -1.28
SNX13-211ENST00000496855 CNNM4Q6P4Q7 775 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 FAM124AQ86V42 546 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 TEPSINQ96N21 525 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 ADAM7Q9H2U9 754 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 ASB1Q9Y576 335 aa7.04□□□□□ -1.28
SNX13-211ENST00000496855 KIF11P52732 1056 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 CTSWP56202 376 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 SDE2Q6IQ49 451 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 DPP8Q6V1X1 898 aaPredicted RBP7.03□□□□□ -1.28
SNX13-211ENST00000496855 KIF18BQ86Y91 864 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 HIPK4Q8NE63 616 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 NUDT10Q8NFP7 164 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 NUDT11Q96G61 164 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 TARS2Q9BW92 718 aaKnown RBP7.03□□□□□ -1.28
SNX13-211ENST00000496855 MTFR1LQ9H019 292 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 UCKL1Q9NWZ5 548 aa7.03□□□□□ -1.28
SNX13-211ENST00000496855 H0Y858 1186 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 H7C1D1 291 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 DVL2O14641 736 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 PPM1KQ8N3J5 372 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 KLHL36Q8N4N3 616 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 MBD6Q96DN6 1003 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 AMNQ9BXJ7 453 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 DUSP10Q9Y6W6 482 aa7.02□□□□□ -1.29
SNX13-211ENST00000496855 PRAMEF22A3QJZ6 481 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 HSD3B2P26439 372 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 IL13RA1P78552 427 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 NFIXQ14938 502 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 ZFYVE27Q5T4F4 411 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 BORAQ6PGQ7 559 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 LILRA6Q6PI73 481 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 BTBD2Q9BX70 525 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 CHMP4AQ9BY43 222 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 BARX1Q9HBU1 254 aaPredicted RBP7.01□□□□□ -1.29
SNX13-211ENST00000496855 ACSS2Q9NR19 701 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 ZKSCAN5Q9Y2L8 839 aa7.01□□□□□ -1.29
SNX13-211ENST00000496855 GOLGA6L22H0YM25 854 aa7□□□□□ -1.29
SNX13-211ENST00000496855 PRICKLE3O43900 615 aaPredicted RBP7□□□□□ -1.29
SNX13-211ENST00000496855 F2P00734 622 aa7□□□□□ -1.29
SNX13-211ENST00000496855 CNR2P34972 360 aa7□□□□□ -1.29
SNX13-211ENST00000496855 ECE1P42892 770 aa7□□□□□ -1.29
SNX13-211ENST00000496855 FNTBP49356 437 aa7□□□□□ -1.29
SNX13-211ENST00000496855 GYS2P54840 703 aa7□□□□□ -1.29
SNX13-211ENST00000496855 NFATC3Q12968 1075 aa7□□□□□ -1.29
SNX13-211ENST00000496855 PCBP1Q15365 356 aaKnown RBP eCLIP7□□□□□ -1.29
SNX13-211ENST00000496855 ZNF174Q15697 407 aa7□□□□□ -1.29
SNX13-211ENST00000496855 TAF7LQ5H9L4 462 aa7□□□□□ -1.29
SNX13-211ENST00000496855 LCE4AQ5TA78 99 aa7□□□□□ -1.29
SNX13-211ENST00000496855 Q6ZUG5 572 aa7□□□□□ -1.29
SNX13-211ENST00000496855 CXXC5Q7LFL8 322 aaKnown RBP7□□□□□ -1.29
SNX13-211ENST00000496855 LGI4Q8N135 537 aa7□□□□□ -1.29
SNX13-211ENST00000496855 KIAA1958Q8N8K9 716 aa7□□□□□ -1.29
SNX13-211ENST00000496855 PCIF1Q9H4Z3 704 aa7□□□□□ -1.29
SNX13-211ENST00000496855 ADAM29Q9UKF5 820 aa7□□□□□ -1.29
SNX13-211ENST00000496855 EIF5BO60841 1220 aaKnown RBP6.99□□□□□ -1.29
SNX13-211ENST00000496855 CYP17A1P05093 508 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 STILQ15468 1287 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 WDR72Q3MJ13 1102 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 UBXN11Q5T124 520 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 CREB3L3Q68CJ9 461 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 LRSAM1Q6UWE0 723 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 RTN4RL1Q86UN2 441 aaPredicted RBP6.99□□□□□ -1.29
SNX13-211ENST00000496855 FERMT3Q86UX7 667 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 AHI1Q8N157 1196 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 NXPE1Q8N323 547 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 ERCC4Q92889 916 aaPredicted RBP6.99□□□□□ -1.29
SNX13-211ENST00000496855 FOXRED1Q96CU9 486 aaPredicted RBP6.99□□□□□ -1.29
SNX13-211ENST00000496855 ZDHHC9Q9Y397 364 aa6.99□□□□□ -1.29
SNX13-211ENST00000496855 A0A087X0B3 334 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 ZNF891A8MT65 544 aaPredicted RBP6.98□□□□□ -1.29
SNX13-211ENST00000496855 GSG1L2A8MUP6 293 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 B4GALT3O60512 393 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 GAS7O60861 476 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 ATP2A2P16615 1042 aaKnown RBP6.98□□□□□ -1.29
SNX13-211ENST00000496855 POLD1P28340 1107 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 DSG1Q02413 1049 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 WDR48Q8TAF3 677 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 RELTQ969Z4 430 aa6.98□□□□□ -1.29
SNX13-211ENST00000496855 AJUBAQ96IF1 538 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms