RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ZBTB48P10074 688 aaPredicted RBP8.33□□□□□ -1.08
SF3B1-212ENST00000496458 SYN1P17600 705 aa8.33□□□□□ -1.08
SF3B1-212ENST00000496458 NFATC3Q12968 1075 aa8.33□□□□□ -1.08
SF3B1-212ENST00000496458 UBE2R2Q712K3 238 aaPredicted RBP8.33□□□□□ -1.08
SF3B1-212ENST00000496458 KLHL36Q8N4N3 616 aa8.33□□□□□ -1.08
SF3B1-212ENST00000496458 ASB15Q8WXK1 588 aa8.33□□□□□ -1.08
SF3B1-212ENST00000496458 GBP4Q96PP9 640 aa8.33□□□□□ -1.08
SF3B1-212ENST00000496458 ZDHHC9Q9Y397 364 aa8.33□□□□□ -1.08
SF3B1-212ENST00000496458 RASSF10A6NK89 507 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 B4GALT3O60512 393 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 ARHGAP44Q17R89 818 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 CFAP100Q494V2 611 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 LCE1DQ5T752 114 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 CDCA2Q69YH5 1023 aaPredicted RBP8.32□□□□□ -1.08
SF3B1-212ENST00000496458 NOP9Q86U38 636 aaKnown RBP8.32□□□□□ -1.08
SF3B1-212ENST00000496458 HIPK4Q8NE63 616 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 WNK4Q96J92 1243 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 INTS7Q9NVH2 962 aaKnown RBP8.32□□□□□ -1.08
SF3B1-212ENST00000496458 GALNT8Q9NY28 637 aa8.32□□□□□ -1.08
SF3B1-212ENST00000496458 PTPDC1A2A3K4 754 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 TRAF5O00463 557 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 MPIG6BO95866 241 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 SDHAP31040 664 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
SF3B1-212ENST00000496458 IL13RA1P78552 427 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 CATSPEREQ5SY80 951 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 ERICH6BQ5W0A0 696 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 DPP8Q6V1X1 898 aaPredicted RBP8.31□□□□□ -1.08
SF3B1-212ENST00000496458 Q6ZUG5 572 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 KBTBD2Q8IY47 623 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 NINJ1Q92982 152 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 FEZ1Q99689 392 aa8.31□□□□□ -1.08
SF3B1-212ENST00000496458 PRAMEF22A3QJZ6 481 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 B8ZZF3 427 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 CBX4O00257 560 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 KIF11P52732 1056 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 WDR72Q3MJ13 1102 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 LRSAM1Q6UWE0 723 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 GPR155Q7Z3F1 870 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
SF3B1-212ENST00000496458 NIM1KQ8IY84 436 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 ERCC4Q92889 916 aaPredicted RBP8.3□□□□□ -1.08
SF3B1-212ENST00000496458 AMNQ9BXJ7 453 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 ADAM29Q9UKF5 820 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 ASB1Q9Y576 335 aa8.3□□□□□ -1.08
SF3B1-212ENST00000496458 KPNA6O60684 536 aa8.29□□□□□ -1.08
SF3B1-212ENST00000496458 CELA3BP08861 270 aa8.29□□□□□ -1.08
SF3B1-212ENST00000496458 CNNM4Q6P4Q7 775 aa8.29□□□□□ -1.08
SF3B1-212ENST00000496458 PLEKHH3Q7Z736 793 aa8.29□□□□□ -1.08
SF3B1-212ENST00000496458 RALYLQ86SE5 291 aaKnown RBP8.29□□□□□ -1.08
SF3B1-212ENST00000496458 LRRTM3Q86VH5 581 aa8.29□□□□□ -1.08
SF3B1-212ENST00000496458 TBX22Q9Y458 520 aa8.29□□□□□ -1.08
SF3B1-212ENST00000496458 DVL2O14641 736 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 ADCY8P40145 1251 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 ECE1P42892 770 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 NEK4P51957 841 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 PLP2Q04941 152 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 TBC1D10BQ4KMP7 808 aaPredicted RBP8.28□□□□□ -1.08
SF3B1-212ENST00000496458 CC2D1AQ6P1N0 951 aaPredicted RBP8.28□□□□□ -1.08
SF3B1-212ENST00000496458 WDR48Q8TAF3 677 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 AJUBAQ96IF1 538 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 BTBD2Q9BX70 525 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 PCIF1Q9H4Z3 704 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 B4GALT6Q9UBX8 382 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 ZNF536O15090 1300 aa8.28□□□□□ -1.08
SF3B1-212ENST00000496458 H7C1D1 291 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 ENPP3O14638 875 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 B4GALT4O60513 344 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 PLATP00750 562 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 POLD1P28340 1107 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 CSF2RBP32927 897 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 TOP3AQ13472 1001 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-212ENST00000496458 SKOR2Q2VWA4 1001 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-212ENST00000496458 REXO1L1PQ8IX06 675 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 KATNBL1Q9H079 304 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 OR10A5Q9H207 317 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 PLAAQ9Y263 795 aa8.27□□□□□ -1.09
SF3B1-212ENST00000496458 FAM83GA6ND36 823 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 GOLGA6L22H0YM25 854 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 LAMTOR5O43504 91 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 STILQ15468 1287 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 SURF1Q15526 300 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 ZNF174Q15697 407 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 DALRD3Q5D0E6 543 aaKnown RBP8.26□□□□□ -1.09
SF3B1-212ENST00000496458 KIAA0907Q7Z7F0 614 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-212ENST00000496458 KIAA1958Q8N8K9 716 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 PTPN22Q9Y2R2 807 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 NCANO14594 1321 aa8.26□□□□□ -1.09
SF3B1-212ENST00000496458 PRRG2O14669 202 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 CUTAO60888 179 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 ZNF888P0CJ79 500 aaPredicted RBP8.25□□□□□ -1.09
SF3B1-212ENST00000496458 CD83Q01151 205 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 KANK2Q63ZY3 851 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 ARHGEF18Q6ZSZ5 1173 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 CXXC5Q7LFL8 322 aaKnown RBP8.25□□□□□ -1.09
SF3B1-212ENST00000496458 OTOP2Q7RTS6 562 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 RTN4RL1Q86UN2 441 aaPredicted RBP8.25□□□□□ -1.09
SF3B1-212ENST00000496458 CALML6Q8TD86 181 aa8.25□□□□□ -1.09
SF3B1-212ENST00000496458 FOXRED1Q96CU9 486 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms