RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 AGO3Q9H9G7 860 aaKnown RBP12.41□□□□□ -0.42
RNF220-217ENST00000496262 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
RNF220-217ENST00000496262 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.4□□□□□ -0.42
RNF220-217ENST00000496262 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 FAM86C2PA6NEL3 165 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 RRN3P2A6NIE6 340 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 CCNE2O96020 404 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 FOSP01100 380 aaPredicted RBP12.4□□□□□ -0.42
RNF220-217ENST00000496262 PTMSP20962 102 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
RNF220-217ENST00000496262 APOBRQ0VD83 1088 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 KRT32Q14532 448 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 LEXMQ3ZCV2 418 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 IER5Q5VY09 327 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 PTCRAQ6ISU1 281 aaPredicted RBP12.4□□□□□ -0.42
RNF220-217ENST00000496262 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 TRMT1LQ7Z2T5 733 aaKnown RBP12.4□□□□□ -0.42
RNF220-217ENST00000496262 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.4□□□□□ -0.42
RNF220-217ENST00000496262 LINC01599Q8WXQ3 324 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 KHSRPQ92945 711 aaKnown RBP eCLIP12.4□□□□□ -0.42
RNF220-217ENST00000496262 SNX21Q969T3 373 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 JAKMIP1Q96N16 626 aaKnown RBP12.4□□□□□ -0.42
RNF220-217ENST00000496262 PPP1R16BQ96T49 567 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 CD320Q9NPF0 282 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 CLDND1Q9NY35 253 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 BARHL2Q9NY43 387 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
RNF220-217ENST00000496262 GINS2Q9Y248 185 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 TRPV2Q9Y5S1 764 aa12.4□□□□□ -0.42
RNF220-217ENST00000496262 NFASCO94856 1347 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 hCG_1984214I3L0E3 225 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 GRM6O15303 877 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 TRAK2O60296 914 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 ADD1P35611 737 aaKnown RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 SREBF1P36956 1147 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 RBM25P49756 843 aaKnown RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 PAK2Q13177 524 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 TMEM266Q2M3C6 531 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 PAN2Q504Q3 1202 aaKnown RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 Q6ZUG5 572 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 PLPPR4Q7Z2D5 763 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 PLA2G4DQ86XP0 818 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 TNPO1Q92973 898 aaKnown RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 BRF1Q92994 677 aa12.39□□□□□ -0.43
RNF220-217ENST00000496262 C11orf84Q9BUA3 381 aaPredicted RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 NSUN3Q9H649 340 aaKnown RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
RNF220-217ENST00000496262 FAM86B1E9PN63 330 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 MEIS1O00470 390 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 HMGB1P09429 215 aaKnown RBP12.38□□□□□ -0.43
RNF220-217ENST00000496262 FAM86B2P0C5J1 330 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 SCG2P13521 617 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 BMPR1AP36894 532 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 MRE11P49959 708 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 GATMP50440 423 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 CLUL1Q15846 466 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 MTHFD1LQ6UB35 978 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
RNF220-217ENST00000496262 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 CELF4Q9BZC1 486 aaKnown RBP12.38□□□□□ -0.43
RNF220-217ENST00000496262 IGFLR1Q9H665 355 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 RC3H2Q9HBD1 1191 aaKnown RBP12.38□□□□□ -0.43
RNF220-217ENST00000496262 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
RNF220-217ENST00000496262 TCEAL9Q9UHQ7 104 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 PADI3Q9ULW8 664 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
RNF220-217ENST00000496262 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
RNF220-217ENST00000496262 IGSF9BQ9UPX0 1349 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 GRXCR2A6NFK2 248 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 DGKIO75912 1065 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 LINC00271P0C7V0 271 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 XRCC6P12956 609 aaKnown RBP eCLIP12.37□□□□□ -0.43
RNF220-217ENST00000496262 KLRC1P26715 233 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 CLK2P49760 499 aaKnown RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 KRT76Q01546 638 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 NFX1Q12986 1120 aaKnown RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 PFKFB3Q16875 520 aaPredicted RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 TMEM31Q5JXX7 168 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 SWSAP1Q6NVH7 229 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 MIS18BP1Q6P0N0 1132 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 PDXDC2PQ6P474 469 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 RTN4RL1Q86UN2 441 aaPredicted RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 FAM178BQ8IXR5 827 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 GJD3Q8N144 294 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 REXO1Q8N1G1 1221 aaKnown RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 NEK9Q8TD19 979 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 RASGRP4Q8TDF6 673 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 PHKBQ93100 1093 aa12.37□□□□□ -0.43
RNF220-217ENST00000496262 PABPC5Q96DU9 382 aaKnown RBP12.37□□□□□ -0.43
RNF220-217ENST00000496262 ZNF577Q9BSK1 485 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms