RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 E4F1Q66K89 784 aaPredicted RBP7.65□□□□□ -1.18
USP39-219ENST00000496047 ANKRD40Q6AI12 368 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 XRRA1Q6P2D8 792 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 ARHGAP27Q6ZUM4 889 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 MIER3Q7Z3K6 550 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 MYPNQ86TC9 1320 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 SYT2Q8N9I0 419 aaPredicted RBP7.65□□□□□ -1.18
USP39-219ENST00000496047 KIAA0895Q8NCT3 520 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 ZNF280CQ8ND82 737 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 EHBP1Q8NDI1 1231 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 MNS1Q8NEH6 495 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 NLGN2Q8NFZ4 835 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 OR8K1Q8NGG5 319 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 CPLX3Q8WVH0 158 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 CRYGNQ8WXF5 182 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 NACC1Q96RE7 527 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 WRNIP1Q96S55 665 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 RIT2Q99578 217 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 EIF2AK1Q9BQI3 630 aaKnown RBP7.65□□□□□ -1.18
USP39-219ENST00000496047 MXRA8Q9BRK3 442 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 WDR18Q9BV38 432 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 TUBB2BQ9BVA1 445 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 REPIN1Q9BWE0 567 aaKnown RBP7.65□□□□□ -1.18
USP39-219ENST00000496047 RPAP3Q9H6T3 665 aaPredicted RBP7.65□□□□□ -1.18
USP39-219ENST00000496047 ODF2LQ9ULJ1 636 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 PPP1R9AQ9ULJ8 1098 aa7.65□□□□□ -1.18
USP39-219ENST00000496047 LRRC37A2A6NM11 1700 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 ARHGEF35A5YM69 484 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 PHF20L1A8MW92 1017 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 B4DLN1 442 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 FAM86B1E9PN63 330 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 TRAF5O00463 557 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 EIF3DO15371 548 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP39-219ENST00000496047 TEX33O43247 280 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 MED24O75448 989 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 SLU7O95391 586 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 GYPCP04921 128 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 FAM86B2P0C5J1 330 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 EPB41P11171 864 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 CYP11B2P19099 503 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 VCAM1P19320 739 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 CCND2P30279 289 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 JAK3P52333 1124 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 SLC12A3P55017 1021 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 ETF1P62495 437 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 JAG1P78504 1218 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 ZBED6P86452 979 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 GHRHRQ02643 423 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 PABPC4Q13310 644 aaKnown RBP eCLIP7.64□□□□□ -1.19
USP39-219ENST00000496047 EPHA7Q15375 998 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 SKIV2LQ15477 1246 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 VWA3BQ502W6 1294 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 ANGEL2Q5VTE6 544 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 PCNX4Q63HM2 1172 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 RNF207Q6ZRF8 634 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 APTXQ7Z2E3 356 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 CACNA2D4Q7Z3S7 1137 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 NLRX1Q86UT6 975 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 LAPTM4BQ86VI4 370 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 CATSPER3Q86XQ3 398 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 FMNL3Q8IVF7 1028 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 CPXCR1Q8N123 301 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 SLC17A8Q8NDX2 589 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 NEK11Q8NG66 645 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 GOLGA5Q8TBA6 731 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 SLC5A5Q92911 643 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 ERO1AQ96HE7 468 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 ABHD8Q96I13 439 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 CDHR1Q96JP9 859 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 C12orf42Q96LP6 360 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 MED15Q96RN5 788 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 ERGIC2Q96RQ1 377 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 MPHOSPH6Q99547 160 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 TIPINQ9BVW5 301 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 TSGA10Q9BZW7 698 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 SLC38A10Q9HBR0 1119 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 METTL14Q9HCE5 456 aaKnown RBP7.64□□□□□ -1.19
USP39-219ENST00000496047 TBC1D22BQ9NU19 505 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 GGA3Q9NZ52 723 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 MYO1AQ9UBC5 1043 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 CSADQ9Y600 493 aa7.64□□□□□ -1.19
USP39-219ENST00000496047 PCNTO95613 3336 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 FRMPD4Q14CM0 1322 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 RPTORQ8N122 1335 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 ZNF541Q9H0D2 1346 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 MCM3APO60318 1980 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 IGLV3-22A0A075B6J6 115 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 FRMD3A2A2Y4 597 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 USP27XA6NNY8 438 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 IPO5O00410 1097 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 SLC16A3O15427 465 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 CHMP2AO43633 222 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 KRT86O43790 486 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 USO1O60763 962 aaKnown RBP7.63□□□□□ -1.19
USP39-219ENST00000496047 PSMD10O75832 226 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 STAM2O75886 525 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 GCNT3O95395 438 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 SFNP31947 248 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 ABCD1P33897 745 aa7.63□□□□□ -1.19
USP39-219ENST00000496047 STAT3P40763 770 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms