RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 FAM49AQ9H0Q0 323 aaPredicted RBP11.06□□□□□ -0.64
CALD1-223ENST00000496024 IL23AQ9NPF7 189 aa11.06□□□□□ -0.64
CALD1-223ENST00000496024 TUBE1Q9UJT0 475 aa11.06□□□□□ -0.64
CALD1-223ENST00000496024 VAV3Q9UKW4 847 aa11.06□□□□□ -0.64
CALD1-223ENST00000496024 PCDHA12Q9UN75 941 aa11.06□□□□□ -0.64
CALD1-223ENST00000496024 MAFBQ9Y5Q3 323 aaPredicted RBP11.06□□□□□ -0.64
CALD1-223ENST00000496024 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 IQCF3P0C7M6 154 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 SELPP16109 830 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 PDCP20941 246 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 TOB1P50616 345 aaPredicted RBP11.05□□□□□ -0.64
CALD1-223ENST00000496024 ADAM17P78536 824 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 TRIM71Q2Q1W2 868 aaKnown RBP11.05□□□□□ -0.64
CALD1-223ENST00000496024 MARCH8Q5T0T0 291 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 B3GNT9Q6UX72 402 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 ZNF365Q70YC5 407 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 LRRC8DQ7L1W4 858 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 C16orf59Q7L2K0 433 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 RDM1Q8NG50 284 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 DNAJB3Q8WWF6 145 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
CALD1-223ENST00000496024 INTS4Q96HW7 963 aaKnown RBP11.05□□□□□ -0.64
CALD1-223ENST00000496024 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.05□□□□□ -0.641e-13■□□□□ 9.6
CALD1-223ENST00000496024 SH2D3AQ9BRG2 576 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 FTOQ9C0B1 505 aaKnown RBP eCLIP11.05□□□□□ -0.642e-10■■□□□ 12.9
CALD1-223ENST00000496024 TTC12Q9H892 705 aaPredicted RBP11.05□□□□□ -0.64
CALD1-223ENST00000496024 RGL1Q9NZL6 768 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 PCDHB6Q9Y5E3 794 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
CALD1-223ENST00000496024 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 TMEM150BA6NC51 233 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 DDX11L8A8MPP1 907 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 OATP04181 439 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 OR52Z1P0C646 297 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 SYT1P21579 422 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 KLRC1P26715 233 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 TRAPPC10P48553 1259 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 CYP4A11Q02928 519 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 EPHA7Q15375 998 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 ZNF484Q5JVG2 852 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 TMEM240Q5SV17 173 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 OTOP2Q7RTS6 562 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 RPUSD2Q8IZ73 545 aaKnown RBP11.04□□□□□ -0.64
CALD1-223ENST00000496024 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
CALD1-223ENST00000496024 DYDC2Q96IM9 177 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 FAM167AQ96KS9 214 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 RNPC3Q96LT9 517 aaKnown RBP11.04□□□□□ -0.64
CALD1-223ENST00000496024 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 NRBP2Q9NSY0 501 aa11.04□□□□□ -0.64
CALD1-223ENST00000496024 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
CALD1-223ENST00000496024 MBLAC1A4D2B0 266 aaPredicted RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 POTEMA6NI47 508 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 ZBBXA8MT70 800 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 RSPH10B2B2RC85 870 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 ZBTB42B2RXF5 422 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 FGBP02675 491 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 RSPH10BP0C881 870 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 TECP42680 631 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 QARSP47897 775 aaKnown RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 PSMC5P62195 406 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 RBL2Q08999 1139 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 SPIRE1Q08AE8 756 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 PTGDRQ13258 359 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 CTTNQ14247 550 aaKnown RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 MTERF2Q49AM1 385 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 PLA2G4FQ68DD2 849 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 TAF2Q6P1X5 1199 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 PSRC1Q6PGN9 363 aaPredicted RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 MTHFD1LQ6UB35 978 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 RSPH3Q86UC2 560 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 TPH2Q8IWU9 490 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 METTL13Q8N6R0 699 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 FOXD4L4Q8WXT5 416 aaPredicted RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 VWCEQ96DN2 955 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 EIF2AK1Q9BQI3 630 aaKnown RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
CALD1-223ENST00000496024 LOXHD1Q8IVV2 1947 aa11.03□□□□□ -0.64
CALD1-223ENST00000496024 A0A1W2PPC1 479 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 NBNO60934 754 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 P4HBP07237 508 aaKnown RBP11.02□□□□□ -0.65
CALD1-223ENST00000496024 RFC2P35250 354 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 CLCN3P51790 818 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 ORC2Q13416 577 aaPredicted RBP11.02□□□□□ -0.65
CALD1-223ENST00000496024 MBTPS1Q14703 1052 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 GPNMBQ14956 572 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 TMEM266Q2M3C6 531 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 RILPL1Q5EBL4 403 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 XKR3Q5GH77 459 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 TRAF7Q6Q0C0 670 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 PPP1R16BQ96T49 567 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 LXNQ9BS40 222 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 OSBPL7Q9BZF2 842 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
CALD1-223ENST00000496024 WRAP73Q9P2S5 460 aaPredicted RBP11.02□□□□□ -0.65
CALD1-223ENST00000496024 GINS2Q9Y248 185 aa11.02□□□□□ -0.65
CALD1-223ENST00000496024 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms