RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 FZD9O00144 591 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 FGF10O15520 208 aaPredicted RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 SNRPB2P08579 225 aaKnown RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 U2AF1L5P0DN76 240 aaPredicted RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 ENDOUP21128 410 aaKnown RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 ALDH1B1P30837 517 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 IARSP41252 1262 aaKnown RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 ECI1P42126 302 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 KCNJ6P48051 423 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 U2AF1Q01081 240 aaKnown RBP eCLIP8.37□□□□□ -1.07
VIM-207ENST00000495528 SSRP1Q08945 709 aaKnown RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 SF1Q15637 639 aaKnown RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 SLC14A2Q15849 920 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 CEP128Q6ZU80 1094 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 RTKN2Q8IZC4 609 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 CNTROBQ8N137 903 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 OXR1Q8N573 874 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 PDZD8Q8NEN9 1154 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 LINC01599Q8WXQ3 324 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 RTF1Q92541 710 aaKnown RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 KRTAP4-8Q9BYQ9 185 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
VIM-207ENST00000495528 SCN7AQ01118 1682 aa8.37□□□□□ -1.07
VIM-207ENST00000495528 RNF123Q5XPI4 1314 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 RAC2P15153 192 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 CTCFP49711 727 aaPredicted RBP8.36□□□□□ -1.07
VIM-207ENST00000495528 DEFB115Q30KQ5 88 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 FYB2Q5VWT5 728 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 KSR1Q8IVT5 923 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 NGEFQ8N5V2 710 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 ANKS4BQ8N8V4 417 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 TMEM52Q8NDY8 209 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 MYLIPQ8WY64 445 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 MKL1Q969V6 931 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 CFAP53Q96M91 514 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 PTCHD1Q96NR3 888 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 SPATA9Q9BWV2 254 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 NKX2-4Q9H2Z4 354 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 PIF1Q9H611 641 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
VIM-207ENST00000495528 DICER1Q9UPY3 1922 aaKnown RBP8.35□□□□□ -1.07
VIM-207ENST00000495528 IGSF3O75054 1194 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 PPP2R1AP30153 589 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 AFMP43652 599 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 GALK1P51570 392 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 LBX1P52954 281 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 TAF7Q15545 349 aaPredicted RBP8.35□□□□□ -1.07
VIM-207ENST00000495528 NFE2L2Q16236 605 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 PRSS53Q2L4Q9 553 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 TIGD5Q53EQ6 642 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 EEF1DP3Q658K8 133 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 RCSD1Q6JBY9 416 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 PNMA8AQ86V59 439 aaPredicted RBP8.35□□□□□ -1.07
VIM-207ENST00000495528 SPPL2CQ8IUH8 684 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 GPC2Q8N158 579 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 LRRC47Q8N1G4 583 aaKnown RBP8.35□□□□□ -1.07
VIM-207ENST00000495528 MRFAP1L1Q96HT8 127 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 CYP26B1Q9NR63 512 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 CLEC1BQ9P126 229 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 TNFRSF10DQ9UBN6 386 aa8.35□□□□□ -1.07
VIM-207ENST00000495528 FITM1A5D6W6 292 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 RASSF10A6NK89 507 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 HTATSF1O43719 755 aaKnown RBP8.34□□□□□ -1.07
VIM-207ENST00000495528 HPXP02790 462 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 RTP1P59025 263 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 LAPTM5Q13571 262 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 HSP90AA2PQ14568 343 aaPredicted RBP8.34□□□□□ -1.07
VIM-207ENST00000495528 CRY2Q49AN0 593 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 YOD1Q5VVQ6 348 aaPredicted RBP8.34□□□□□ -1.07
VIM-207ENST00000495528 LRP10Q7Z4F1 713 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 ATG4DQ86TL0 474 aaPredicted RBP8.34□□□□□ -1.07
VIM-207ENST00000495528 CPNE8Q86YQ8 564 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 ABHD4Q8TB40 342 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 SGSM3Q96HU1 749 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 PSMD1Q99460 953 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 AARSD1Q9BTE6 412 aaKnown RBP8.34□□□□□ -1.07
VIM-207ENST00000495528 IER2Q9BTL4 223 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 ARHGEF4Q9NR80 690 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 GPR160Q9UJ42 338 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 SIPA1L3O60292 1781 aaPredicted RBP8.34□□□□□ -1.07
VIM-207ENST00000495528 ABCC12Q96J65 1359 aa8.34□□□□□ -1.07
VIM-207ENST00000495528 WDR33Q9C0J8 1336 aaKnown RBP8.33□□□□□ -1.08
VIM-207ENST00000495528 FADS2P1A8MWK0 482 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 ERVV-1B6SEH8 477 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 TCERG1O14776 1098 aaKnown RBP8.33□□□□□ -1.08
VIM-207ENST00000495528 PRODHO43272 600 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 PSPNO60542 156 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 TBC1D8O95759 1140 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 THBDP07204 575 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 HSPA8P11142 646 aaKnown RBP8.33□□□□□ -1.08
VIM-207ENST00000495528 PLS3P13797 630 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 HOXC12P31275 282 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 EPS15P42566 896 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 KIR2DL1P43626 348 aaPredicted RBP8.33□□□□□ -1.08
VIM-207ENST00000495528 KIR2DL2P43627 348 aaPredicted RBP8.33□□□□□ -1.08
VIM-207ENST00000495528 CHRNEQ04844 493 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 KIR3DS1Q14943 382 aa8.33□□□□□ -1.08
VIM-207ENST00000495528 TTLL7Q6ZT98 887 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms