RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SHBGP04278 402 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 SMARCA1P28370 1054 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 SEPT2Q15019 361 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 GKAP1Q5VSY0 366 aaPredicted RBP16.76■□□□□ 0.27
SDF4-207ENST00000494748 NELFCDQ8IXH7 590 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 FAXDC2Q96IV6 333 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 RIOX1Q9H6W3 641 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 NPHP3-ACAD11A0A0J9YXS1 232 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 GCFC2P16383 781 aaKnown RBP16.76■□□□□ 0.27
SDF4-207ENST00000494748 DHX9Q08211 1270 aaKnown RBP16.76■□□□□ 0.27
SDF4-207ENST00000494748 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 ATP6V1G2O95670 118 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 UCHL3P15374 230 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 NF2P35240 595 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 JAM2P57087 298 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 PIGWQ7Z7B1 504 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 CHMP6Q96FZ7 201 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 VEZTQ9HBM0 779 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
SDF4-207ENST00000494748 A0A0G2JS52 829 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 KRT71Q3SY84 523 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 SPDYCQ5MJ68 293 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 UBAP2Q5T6F2 1119 aaKnown RBP16.75■□□□□ 0.27
SDF4-207ENST00000494748 CEP57Q86XR8 500 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 TRIM51Q9BSJ1 452 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 KCNMB3Q9NPA1 279 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 FRMD3A2A2Y4 597 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 CCT8L1PA6NM43 557 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 RTN2O75298 545 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 TMEM266Q2M3C6 531 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 KRT79Q5XKE5 535 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 ALKBH5Q6P6C2 394 aaKnown RBP16.75■□□□□ 0.27
SDF4-207ENST00000494748 TTC7AQ9ULT0 858 aaPredicted RBP16.75■□□□□ 0.27
SDF4-207ENST00000494748 COL14A1Q05707 1796 aaKnown RBP16.75■□□□□ 0.27
SDF4-207ENST00000494748 TRIM37O94972 964 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 PON1P27169 355 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 HOXD13P35453 343 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 E2F5Q15329 346 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 ACCSLQ4AC99 568 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 ODF2Q5BJF6 829 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 SLC51AQ86UW1 340 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 ZNF444Q8N0Y2 327 aaPredicted RBP16.75■□□□□ 0.27
SDF4-207ENST00000494748 SCLT1Q96NL6 688 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 LRRC27Q9C0I9 530 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 VAT1LQ9HCJ6 419 aa16.75■□□□□ 0.27
SDF4-207ENST00000494748 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.75■□□□□ 0.27
SDF4-207ENST00000494748 A0A0A6YYK5 440 aaPredicted RBP16.74■□□□□ 0.27
SDF4-207ENST00000494748 CASP5P51878 434 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 IFFO1Q0D2I5 559 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 EP400NLQ6ZTU2 488 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 CNOT10Q9H9A5 744 aaKnown RBP16.74■□□□□ 0.27
SDF4-207ENST00000494748 ATP2C2O75185 946 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 MMP13P45452 471 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
SDF4-207ENST00000494748 SOGA3Q5TF21 947 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 COA7Q96BR5 231 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 DPH5Q9H2P9 285 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 DDX3XO00571 662 aaKnown RBP eCLIP16.74■□□□□ 0.271e-9■□□□□ 10
SDF4-207ENST00000494748 DDX3YO15523 660 aaKnown RBP16.74■□□□□ 0.27
SDF4-207ENST00000494748 NUDT17P0C025 328 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 IBSPP21815 317 aaPredicted RBP16.74■□□□□ 0.27
SDF4-207ENST00000494748 CLK2P49760 499 aaKnown RBP16.74■□□□□ 0.27
SDF4-207ENST00000494748 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
SDF4-207ENST00000494748 E9PMD0 336 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 KLRC3Q07444 240 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 DIXDC1Q155Q3 683 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 ARSHQ5FYA8 562 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 DUPD1Q68J44 220 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
SDF4-207ENST00000494748 NEDD1Q8NHV4 660 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 TGFBRAP1Q8WUH2 860 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 FAM114A2Q9NRY5 505 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 SAP30BPQ9UHR5 308 aaKnown RBP16.73■□□□□ 0.27
SDF4-207ENST00000494748 HDAC9Q9UKV0 1011 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 CHN1P15882 459 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 ADAM9Q13443 819 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 EDRF1Q3B7T1 1238 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 PEX26Q7Z412 305 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 CPLX4Q7Z7G2 160 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 RNF25Q96BH1 459 aaPredicted RBP16.73■□□□□ 0.27
SDF4-207ENST00000494748 ERVK-5Q9HDB9 667 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 SEC63Q9UGP8 760 aaKnown RBP16.73■□□□□ 0.27
SDF4-207ENST00000494748 BZW2Q9Y6E2 419 aaKnown RBP16.73■□□□□ 0.27
SDF4-207ENST00000494748 ASAP2O43150 1006 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 PPP4CP60510 307 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 EPHA7Q15375 998 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 ZDHHC24Q6UX98 284 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 EBF2Q9HAK2 575 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 ATP8A1Q9Y2Q0 1164 aa16.73■□□□□ 0.27
SDF4-207ENST00000494748 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 CYP11B2P19099 503 aa16.72■□□□□ 0.27
SDF4-207ENST00000494748 CDK8P49336 464 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms