RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 ZNF215Q9UL58 517 aaPredicted RBP13.17□□□□□ -0.3
UBA3-211ENST00000493957 NOD1Q9Y239 953 aa13.17□□□□□ -0.3
UBA3-211ENST00000493957 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 ACRP10323 421 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBA3-211ENST00000493957 STAT5BP51692 787 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 ADAM17P78536 824 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 C9orf50Q5SZB4 431 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 MIS18BP1Q6P0N0 1132 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 TRMT1LQ7Z2T5 733 aaKnown RBP13.16□□□□□ -0.3
UBA3-211ENST00000493957 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 ATP6V0A1Q93050 837 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 SNX21Q969T3 373 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 AZI2Q9H6S1 392 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 DISC1Q9NRI5 854 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 GABBR1Q9UBS5 961 aa13.16□□□□□ -0.3
UBA3-211ENST00000493957 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
UBA3-211ENST00000493957 IGSF9BQ9UPX0 1349 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 WDR64B1ANS9 1081 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 ZNF862O60290 1169 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 INSRRP14616 1297 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 MCM7P33993 719 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 BMP8BP34820 402 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 TOB1P50616 345 aaPredicted RBP13.15□□□□□ -0.3
UBA3-211ENST00000493957 IGBP1P78318 339 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 FPGSQ05932 587 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
UBA3-211ENST00000493957 ZNF174Q15697 407 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 GRIK4Q16099 956 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 MARCH8Q5T0T0 291 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 PDXDC2PQ6P474 469 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 C16orf59Q7L2K0 433 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 PLPPR4Q7Z2D5 763 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 MIER3Q7Z3K6 550 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 SERINC5Q86VE9 423 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 OSBPL7Q9BZF2 842 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 SAMM50Q9Y512 469 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
UBA3-211ENST00000493957 LAMA2P24043 3122 aaKnown RBP13.15□□□□□ -0.31
UBA3-211ENST00000493957 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 ZBTB42B2RXF5 422 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 NEMFO60524 1076 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 PSAPP07602 524 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 CKBP12277 381 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 SPIRE1Q08AE8 756 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 PTK7Q13308 1070 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 GPNMBQ14956 572 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 SHHQ15465 462 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 CALCRLQ16602 461 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 TTC38Q5R3I4 469 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 FAM160B1Q5W0V3 765 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
UBA3-211ENST00000493957 SMAP1Q8IYB5 467 aaPredicted RBP13.14□□□□□ -0.31
UBA3-211ENST00000493957 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 NAP1L4Q99733 375 aaKnown RBP13.14□□□□□ -0.31
UBA3-211ENST00000493957 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
UBA3-211ENST00000493957 MAFBQ9Y5Q3 323 aaPredicted RBP13.14□□□□□ -0.31
UBA3-211ENST00000493957 H3BQV1 296 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 TBX3O15119 743 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 IQCF3P0C7M6 154 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 JAK3P52333 1124 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 PRKCEQ02156 737 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 RBL2Q08999 1139 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 PPP2R5CQ13362 524 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 MBTPS1Q14703 1052 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 TCTN1Q2MV58 587 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
UBA3-211ENST00000493957 ZNF618Q5T7W0 954 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 NCAPH2Q6IBW4 605 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 CKAP2LQ8IYA6 745 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 TMEM199Q8N511 208 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 ATP8B4Q8TF62 1192 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 FAM20AQ96MK3 541 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 MTMR9Q96QG7 549 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.13□□□□□ -0.314e-10■■■■□ 26
UBA3-211ENST00000493957 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
UBA3-211ENST00000493957 KIF3AQ9Y496 699 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 LAMA3Q16787 3333 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 TCHHQ07283 1943 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
UBA3-211ENST00000493957 MBLAC1A4D2B0 266 aaPredicted RBP13.12□□□□□ -0.31
UBA3-211ENST00000493957 VPS37CA5D8V6 355 aaPredicted RBP13.12□□□□□ -0.31
UBA3-211ENST00000493957 SOX1O00570 391 aaPredicted RBP13.12□□□□□ -0.31
UBA3-211ENST00000493957 MARCH6O60337 910 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 STBD1O95210 358 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 CTSHP09668 335 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 THPOP40225 353 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 TXKP42681 527 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms