RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 AGO4Q9HCK5 861 aaKnown RBP19.85■□□□□ 0.77
COL9A1-210ENST00000493682 MRPL42Q9Y6G3 142 aaKnown RBP19.85■□□□□ 0.77
COL9A1-210ENST00000493682 IGSF9BQ9UPX0 1349 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 M0QZ92 97 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 FOSP01100 380 aaPredicted RBP19.84■□□□□ 0.77
COL9A1-210ENST00000493682 MMP1P03956 469 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 GTF2F1P35269 517 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL9A1-210ENST00000493682 DLX2Q07687 328 aaPredicted RBP19.84■□□□□ 0.77
COL9A1-210ENST00000493682 FUT2Q10981 343 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 CEP55Q53EZ4 464 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 PPP1R18Q6NYC8 613 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 NPAS4Q8IUM7 802 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 TEX2Q8IWB9 1127 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 ADHFE1Q8IWW8 467 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 CMTR2Q8IYT2 770 aaKnown RBP19.84■□□□□ 0.77
COL9A1-210ENST00000493682 CELF4Q9BZC1 486 aaKnown RBP19.84■□□□□ 0.77
COL9A1-210ENST00000493682 ALG13Q9NP73 1137 aaKnown RBP19.84■□□□□ 0.77
COL9A1-210ENST00000493682 RBM28Q9NW13 759 aaKnown RBP19.84■□□□□ 0.77
COL9A1-210ENST00000493682 PADI3Q9ULW8 664 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 PLAGL2Q9UPG8 496 aa19.84■□□□□ 0.77
COL9A1-210ENST00000493682 MYO7AQ13402 2215 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 C19orf67A6NJJ6 358 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 STXBP3O00186 592 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 MEIS1O00470 390 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 DCXO43602 365 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 CSPG5O95196 566 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 ADCY7P51828 1080 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 PAK2Q13177 524 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 CAMK1Q14012 370 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 CLUL1Q15846 466 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 P2RX5Q93086 422 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 ANO3Q9BYT9 981 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 BRPF3Q9ULD4 1205 aa19.83■□□□□ 0.77
COL9A1-210ENST00000493682 V9GY48 417 aaPredicted RBP19.83■□□□□ 0.77
COL9A1-210ENST00000493682 SMIM35A0A1B0GVV1 85 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 ATG7O95352 703 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 EXOSC10Q01780 885 aaKnown RBP19.82■□□□□ 0.76
COL9A1-210ENST00000493682 RTN1Q16799 776 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 RNF20Q5VTR2 975 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 MTHFD1LQ6UB35 978 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 NME8Q8N427 588 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 TCEANC2Q96MN5 208 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 NEK1Q96PY6 1258 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 IGFLR1Q9H665 355 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 TMEM260Q9NX78 707 aa19.82■□□□□ 0.76
COL9A1-210ENST00000493682 KDM3AQ9Y4C1 1321 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 IGKV6D-21A0A0A0MT36 114 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 SMCO2A6NFE2 343 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 LINC01565O15544 149 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 ZBTB43O43298 467 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 TBX10O75333 385 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 CCNE2O96020 404 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 ITGB1P05556 798 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 STAG3L1P0CL83 205 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 SCG2P13521 617 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 DNAJB1P25685 340 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 SREBF1P36956 1147 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 SLC26A2P50443 739 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 KRT76Q01546 638 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 SMAD2Q15796 467 aaKnown RBP19.81■□□□□ 0.76
COL9A1-210ENST00000493682 PAN2Q504Q3 1202 aaKnown RBP19.81■□□□□ 0.76
COL9A1-210ENST00000493682 NAALADL2Q58DX5 795 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 SPPL3Q8TCT6 385 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 UIMC1Q96RL1 719 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 TMX1Q9H3N1 280 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 BARHL2Q9NY43 387 aa19.81■□□□□ 0.76
COL9A1-210ENST00000493682 hCG_1984214I3L0E3 225 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 MBTPS2O43462 519 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 KLRC1P26715 233 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 CLK2P49760 499 aaKnown RBP19.8■□□□□ 0.76
COL9A1-210ENST00000493682 AP3B2Q13367 1082 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 ADAM15Q13444 863 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 CSPP1Q1MSJ5 1256 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 TMEM266Q2M3C6 531 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 DHX32Q7L7V1 743 aaKnown RBP19.8■□□□□ 0.76
COL9A1-210ENST00000493682 ZNF713Q8N859 430 aaPredicted RBP19.8■□□□□ 0.76
COL9A1-210ENST00000493682 KLHL23Q8NBE8 558 aa19.8■□□□□ 0.76
COL9A1-210ENST00000493682 FAM217BQ9NTX9 383 aaPredicted RBP19.8■□□□□ 0.76
COL9A1-210ENST00000493682 DDX39AO00148 427 aaKnown RBP19.79■□□□□ 0.76
COL9A1-210ENST00000493682 BACH1O14867 736 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 HBP1O60381 514 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 IRS1P35568 1242 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 ZNF76P36508 570 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 GATMP50440 423 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 SMAD4Q13485 552 aaKnown RBP19.79■□□□□ 0.76
COL9A1-210ENST00000493682 ABHD15Q6UXT9 468 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 NIPA1Q7RTP0 329 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 ATP8B4Q8TF62 1192 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 UPF3BQ9BZI7 483 aaKnown RBP19.79■□□□□ 0.76
COL9A1-210ENST00000493682 GLT8D2Q9H1C3 349 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 CDHR5Q9HBB8 845 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 ERVK-5Q9HDB9 667 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 CD207Q9UJ71 328 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 LRFN2Q9ULH4 789 aa19.79■□□□□ 0.76
COL9A1-210ENST00000493682 GOLGA8AA7E2F4 631 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 GOLGA8BA8MQT2 603 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 FAM86B1E9PN63 330 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 FAM86B2P0C5J1 330 aa19.78■□□□□ 0.76
COL9A1-210ENST00000493682 SARSP49591 514 aaKnown RBP19.78■□□□□ 0.76
COL9A1-210ENST00000493682 NFX1Q12986 1120 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms