RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SREBF1P36956 1147 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 ITGB3BPQ13352 177 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 AP3B2Q13367 1082 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 COL19A1Q14993 1142 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 ADCK5Q3MIX3 580 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 CENPQQ7L2Z9 268 aaPredicted RBP11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 DHX32Q7L7V1 743 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 PLPPR4Q7Z2D5 763 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 LINC01599Q8WXQ3 324 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 CLP1Q92989 425 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 FAM122AQ96E09 287 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 LMAN2LQ9H0V9 348 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 AGO4Q9HCK5 861 aaKnown RBP11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 C11orf16Q9NQ32 467 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 TMEM260Q9NX78 707 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 PADI3Q9ULW8 664 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 HCN4Q9Y3Q4 1203 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 PCDHA2Q9Y5H9 948 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
NUDCD3-210ENST00000493613 KLF18A0A0U1RQI7 1052 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 SMIM35A0A1B0GVV1 85 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 DDX39AO00148 427 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 MEIS1O00470 390 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 CSPG5O95196 566 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 ATG7O95352 703 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 ZNF76P36508 570 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 CLK2P49760 499 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 SLC26A2P50443 739 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 PAK2Q13177 524 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 KRT32Q14532 448 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 CELF4Q9BZC1 486 aaKnown RBP11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 GLT8D2Q9H1C3 349 aa11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 NAP1L2Q9ULW6 460 aaPredicted RBP11.7□□□□□ -0.54
NUDCD3-210ENST00000493613 KDM3AQ9Y4C1 1321 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 BACH1O14867 736 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 NCK2O43639 380 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 MMP1P03956 469 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 STAG3L1P0CL83 205 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 CDC27P30260 824 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 LTBRP36941 435 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 FGD1P98174 961 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 KRT76Q01546 638 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 HYAL1Q12794 435 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 TSGA10IPQ3SY00 556 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 FAM160B1Q5W0V3 765 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 MTHFD1LQ6UB35 978 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 NIPA1Q7RTP0 329 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 RTN4RL1Q86UN2 441 aaPredicted RBP11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 CMTR2Q8IYT2 770 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 P2RX5Q93086 422 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 PLVAPQ9BX97 442 aa11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 ALG13Q9NP73 1137 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 MRPL42Q9Y6G3 142 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-210ENST00000493613 COL1A2P08123 1366 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 IGKV6D-21A0A0A0MT36 114 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 FAM86B1E9PN63 330 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 CDC45O75419 566 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 CCNE2O96020 404 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 HMGB1P09429 215 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 FAM86B2P0C5J1 330 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 SCG2P13521 617 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 ALADP13716 330 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 KLRC1P26715 233 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 METAP2P50579 478 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 RCAN1P53805 252 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 PFKFB3Q16875 520 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 TMEM266Q2M3C6 531 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 CTC1Q2NKJ3 1217 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 PAN2Q504Q3 1202 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 ABHD15Q6UXT9 468 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 PLA2G4DQ86XP0 818 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 CCDC60Q8IWA6 550 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 NME8Q8N427 588 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 IGFLR1Q9H665 355 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 ZNF302Q9NR11 478 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 PRKAG3Q9UGI9 489 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 LRFN2Q9ULH4 789 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 PLAGL2Q9UPG8 496 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 GINS2Q9Y248 185 aa11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 ARIH1Q9Y4X5 557 aaPredicted RBP11.68□□□□□ -0.54
NUDCD3-210ENST00000493613 IGLV3-22A0A075B6J6 115 aa11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 PRR33A8MZF0 331 aa11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 IPO5O00410 1097 aaKnown RBP11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 HBP1O60381 514 aa11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 CPA1P15085 419 aa11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 IBSPP21815 317 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 GTF2F1P35269 517 aaKnown RBP eCLIP11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
NUDCD3-210ENST00000493613 ZP2Q05996 745 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms