RNA–Protein interactions for RNA: ENST00000493470.2

ATRX-207, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 2,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-207ENST00000493470 SOX18P35713 384 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 MAPK9P45984 424 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 MAN2A2P49641 1150 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 MECOMQ03112 1051 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 CACNB2Q08289 660 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 COX10Q12887 443 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 ANKRD34AQ69YU3 496 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 DBX2Q6ZNG2 339 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 SPATC1Q76KD6 591 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 TNS4Q8IZW8 715 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 TAB3Q8N5C8 712 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 RHPN1Q8TCX5 695 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 STON2Q8WXE9 905 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 JAKMIP2Q96AA8 810 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 CEP95Q96GE4 821 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 RSRC1Q96IZ7 334 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 HAUS7Q99871 368 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 ATP6V0A4Q9HBG4 840 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 DDX21Q9NR30 783 aaKnown RBP eCLIP3.6□□□□□ -1.83
ATRX-207ENST00000493470 DDX20Q9UHI6 824 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 HERC5Q9UII4 1024 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 ITIH6Q6UXX5 1313 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 TTC21BQ7Z4L5 1316 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 KDM2BQ8NHM5 1336 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 F5H423 210 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 EYA2O00167 538 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 STXBP3O00186 592 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 RTCAO00442 366 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 CTAGE5O15320 804 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 KRT20P35900 424 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 PIP4K2BP78356 416 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 DMTNQ08495 405 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 CBX2Q14781 532 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 SHROOM1Q2M3G4 852 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 INTS11Q5TA45 600 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 VPS53Q5VIR6 699 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 SPATA1Q5VX52 437 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 SRLQ86TD4 932 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 CARNMT1Q8N4J0 409 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 ZSCAN18Q8TBC5 510 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 SHDQ96IW2 340 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 ZNF396Q96N95 335 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 GSX2Q9BZM3 304 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 FBRSQ9HAH7 460 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 SLC5A4Q9NY91 659 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 PDP2Q9P2J9 529 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 HCN2Q9UL51 889 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 ZNF232Q9UNY5 417 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 MAPK8IP1Q9UQF2 711 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 R3HCC1Q9Y3T6 440 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 ADAMTSL1Q8N6G6 1762 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 DCDC2BA2VCK2 349 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 GRK2P25098 689 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 PKN1Q16512 942 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 NUGGCQ68CJ6 796 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 EP400NLQ6ZTU2 488 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 PRAM1Q96QH2 718 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 NAA15Q9BXJ9 866 aaKnown RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 ADAM19Q9H013 955 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 SAP130Q9H0E3 1048 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 TSPAN10Q9H1Z9 355 aaPredicted RBP3.6□□□□□ -1.83
ATRX-207ENST00000493470 NKIRAS2Q9NYR9 191 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 PFDN2Q9UHV9 154 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 GJD2Q9UKL4 321 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 BLOC1S6Q9UL45 172 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 ITM2BQ9Y287 266 aa3.6□□□□□ -1.83
ATRX-207ENST00000493470 N4BP2Q86UW6 1770 aaPredicted RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 A0A087WZG4 1122 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 ELL2O00472 640 aaPredicted RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 OPLAHO14841 1288 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 SKAP2O75563 359 aaPredicted RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 TIPRLO75663 272 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 IL33O95760 270 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 XBP1P17861 261 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 ALDH5A1P51649 535 aaPredicted RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 PLIN5Q00G26 463 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 G3BP1Q13283 466 aaKnown RBP eCLIP3.59□□□□□ -1.83
ATRX-207ENST00000493470 PABPC4Q13310 644 aaKnown RBP eCLIP3.59□□□□□ -1.83
ATRX-207ENST00000493470 MTERF2Q49AM1 385 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 SLC6A19Q695T7 634 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 WWC2Q6AWC2 1192 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 FASTKD5Q7L8L6 764 aaKnown RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 SLC41A1Q8IVJ1 513 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 MOGAT1Q96PD6 335 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 SLC30A3Q99726 388 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 HINFPQ9BQA5 517 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 OSBPL7Q9BZF2 842 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 UBE2OQ9C0C9 1292 aaKnown RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 RPAP3Q9H6T3 665 aaPredicted RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 ELAC1Q9H777 363 aaKnown RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 CYP4F11Q9HBI6 524 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 CHCHD3Q9NX63 227 aaKnown RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 RRN3Q9NYV6 651 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 MAPRE3Q9UPY8 281 aa3.59□□□□□ -1.83
ATRX-207ENST00000493470 LRRFIP2Q9Y608 721 aaKnown RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 COL3A1P02461 1466 aaPredicted RBP3.59□□□□□ -1.83
ATRX-207ENST00000493470 AREL1O15033 823 aa3.59□□□□□ -1.84
ATRX-207ENST00000493470 MICAL2O94851 1124 aa3.59□□□□□ -1.84
ATRX-207ENST00000493470 SLC4A1P02730 911 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms