RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 FAM86B2P0C5J1 330 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 STAG3L1P0CL83 205 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 IFNAR1P17181 557 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 GPM6BQ13491 265 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 PUS10Q3MIT2 529 aaKnown RBP14.15□□□□□ -0.14
COL6A1-205ENST00000492851 TIGD5Q53EQ6 642 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 ZNF746Q6NUN9 644 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-205ENST00000492851 SPRED2Q7Z698 418 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 TRIM22Q8IYM9 498 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 FAM177A1Q8N128 213 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-205ENST00000492851 ZNF710Q8N1W2 664 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 ATP8B4Q8TF62 1192 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 CRYGNQ8WXF5 182 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 ZNF577Q9BSK1 485 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 CELF4Q9BZC1 486 aaKnown RBP14.15□□□□□ -0.14
COL6A1-205ENST00000492851 C22orf23Q9BZE7 217 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 FAM49AQ9H0Q0 323 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-205ENST00000492851 ZNF302Q9NR11 478 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 SH3GLB2Q9NR46 395 aa14.15□□□□□ -0.14
COL6A1-205ENST00000492851 KDM3AQ9Y4C1 1321 aa14.15□□□□□ -0.15
COL6A1-205ENST00000492851 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-205ENST00000492851 CPA1P15085 419 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 KLRC1P26715 233 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 CIITAP33076 1130 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 USP11P51784 963 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 KRT76Q01546 638 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 PKN1Q16512 942 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 PDXDC2PQ6P474 469 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 CPLX2Q6PUV4 134 aaKnown RBP14.14□□□□□ -0.15
COL6A1-205ENST00000492851 MTHFD1LQ6UB35 978 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 RUFY3Q7L099 469 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 BBXQ8WY36 941 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-205ENST00000492851 C11orf84Q9BUA3 381 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-205ENST00000492851 PLVAPQ9BX97 442 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 OSBPL7Q9BZF2 842 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 LMAN2LQ9H0V9 348 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 CEP131Q9UPN4 1083 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 CYP46A1Q9Y6A2 500 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 COL4A6Q14031 1691 aa14.14□□□□□ -0.15
COL6A1-205ENST00000492851 IGLV3-22A0A075B6J6 115 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 C5orf67F2Z3F1 127 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 DHX15O43143 795 aaKnown RBP14.13□□□□□ -0.15
COL6A1-205ENST00000492851 CCNE2O96020 404 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 PSAPP07602 524 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 PDIA3P30101 505 aaKnown RBP14.13□□□□□ -0.15
COL6A1-205ENST00000492851 BMPR1AP36894 532 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 KCNQ1P51787 676 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 PAK2Q13177 524 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 BTG3Q14201 252 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-205ENST00000492851 NTRK3Q16288 839 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 NAALADL2Q58DX5 795 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 SWSAP1Q6NVH7 229 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 CKAP2LQ8IYA6 745 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 BANK1Q8NDB2 785 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 C1QTNF1Q9BXJ1 281 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 TM6SF1Q9BZW5 370 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 PADI3Q9ULW8 664 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 PCDHA10Q9Y5I2 948 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 MAFBQ9Y5Q3 323 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-205ENST00000492851 IGSF9BQ9UPX0 1349 aa14.13□□□□□ -0.15
COL6A1-205ENST00000492851 DDX39AO00148 427 aaKnown RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 GPR182O15218 404 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 MAGEB2O15479 319 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 DGKIO75912 1065 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 NEFLP07196 543 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 CD52P31358 61 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 LEXMQ3ZCV2 418 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 NPAS4Q8IUM7 802 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 CLP1Q92989 425 aaKnown RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 PHKBQ93100 1093 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 ZNF689Q96CS4 500 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 ZNF274Q96GC6 653 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 FAM167AQ96KS9 214 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 SLC26A6Q9BXS9 759 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 NSUN3Q9H649 340 aaKnown RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 UBE2ZQ9H832 354 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 AGO3Q9H9G7 860 aaKnown RBP14.12□□□□□ -0.15
COL6A1-205ENST00000492851 FAM50BQ9Y247 325 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
COL6A1-205ENST00000492851 WDR64B1ANS9 1081 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 CPLX1O14810 134 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 TMOD1P28289 359 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 CTNNB1P35222 781 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 NLRP5P59047 1200 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 PRR16Q569H4 304 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 GALNT17Q6IS24 598 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 CCDC60Q8IWA6 550 aaPredicted RBP14.11□□□□□ -0.15
COL6A1-205ENST00000492851 CMTR2Q8IYT2 770 aaKnown RBP14.11□□□□□ -0.15
COL6A1-205ENST00000492851 TRAPPC12Q8WVT3 735 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 P2RX5Q93086 422 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 RIT2Q99578 217 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 C1orf112Q9NSG2 853 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 NRBP2Q9NSY0 501 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 LRFN2Q9ULH4 789 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 PTPRSQ13332 1948 aa14.11□□□□□ -0.15
COL6A1-205ENST00000492851 EIF5BO60841 1220 aaKnown RBP14.1□□□□□ -0.15
COL6A1-205ENST00000492851 RPS6KA5O75582 802 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms