RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 COL4A4P53420 1690 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-212ENST00000492407 IGSF9BQ9UPX0 1349 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 CCDC196A0A1B0GTZ2 297 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 PRR33A8MZF0 331 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 ZBTB43O43298 467 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 HBP1O60381 514 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 MMP1P03956 469 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 CYP3A4P08684 503 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 SREBF1P36956 1147 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 CLK2P49760 499 aaKnown RBP10.41□□□□□ -0.74
HDAC3-212ENST00000492407 ADCY7P51828 1080 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 NAPAP54920 295 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 ACTR2P61160 394 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 BTG3Q14201 252 aaPredicted RBP10.41□□□□□ -0.74
HDAC3-212ENST00000492407 PLCB4Q15147 1175 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 RTN1Q16799 776 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 WWC2Q6AWC2 1192 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 MICU3Q86XE3 530 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 CCDC82Q8N4S0 544 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 CELF4Q9BZC1 486 aaKnown RBP10.41□□□□□ -0.74
HDAC3-212ENST00000492407 AGO4Q9HCK5 861 aaKnown RBP10.41□□□□□ -0.74
HDAC3-212ENST00000492407 CD320Q9NPF0 282 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 TRPC6Q9Y210 931 aa10.41□□□□□ -0.74
HDAC3-212ENST00000492407 COL1A2P08123 1366 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 CNTNAP5Q8WYK1 1306 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 MICAL3Q7RTP6 2002 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 ESYT2A0FGR8 921 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 POTEB3A0JP26 581 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 FSD2A1L4K1 749 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 SMCO2A6NFE2 343 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 STXBP3O00186 592 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 CLSTN1O94985 981 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 CHRM1P11229 460 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-212ENST00000492407 IL9P15248 144 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 RXRAP19793 462 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 MARK3P27448 753 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 KRT76Q01546 638 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 ZNF484Q5JVG2 852 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 MTHFD1LQ6UB35 978 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 ABHD15Q6UXT9 468 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 RTN4RL1Q86UN2 441 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-212ENST00000492407 ADHFE1Q8IWW8 467 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 FBXL16Q8N461 479 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 CCDC12Q8WUD4 166 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-212ENST00000492407 POP1Q99575 1024 aaKnown RBP10.4□□□□□ -0.74
HDAC3-212ENST00000492407 ANO3Q9BYT9 981 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 KCNH6Q9H252 994 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 AGO3Q9H9G7 860 aaKnown RBP10.4□□□□□ -0.74
HDAC3-212ENST00000492407 TBC1D22BQ9NU19 505 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 PADI3Q9ULW8 664 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 PLAGL2Q9UPG8 496 aa10.4□□□□□ -0.74
HDAC3-212ENST00000492407 V9GY48 417 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-212ENST00000492407 BAZ2BQ9UIF8 2168 aaKnown RBP10.39□□□□□ -0.75
HDAC3-212ENST00000492407 hCG_1642624A0A1W2PR95 340 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 GRM6O15303 877 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 ARP10275 920 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 SCG2P13521 617 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 CD52P31358 61 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 SSTR3P32745 418 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-212ENST00000492407 ZNF76P36508 570 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 LTBRP36941 435 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 IGBP1P78318 339 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-212ENST00000492407 UBE3AQ05086 875 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 PAK2Q13177 524 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 ITGB3BPQ13352 177 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-212ENST00000492407 SMAD2Q15796 467 aaKnown RBP10.39□□□□□ -0.75
HDAC3-212ENST00000492407 CSPP1Q1MSJ5 1256 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 MIS18BP1Q6P0N0 1132 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 SMAP1Q8IYB5 467 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-212ENST00000492407 CYP2W1Q8TAV3 490 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 ATP8B4Q8TF62 1192 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 CRYGNQ8WXF5 182 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 CCDC136Q96JN2 1154 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 LRRC2Q9BYS8 371 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 C11orf16Q9NQ32 467 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 C1orf112Q9NSG2 853 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 CLDND1Q9NY35 253 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 PKD2L1Q9P0L9 805 aa10.39□□□□□ -0.75
HDAC3-212ENST00000492407 GOLGA8AA7E2F4 631 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 GOLGA8BA8MQT2 603 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 H3BQ06 376 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-212ENST00000492407 GPR182O15218 404 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 DHX15O43143 795 aaKnown RBP10.38□□□□□ -0.75
HDAC3-212ENST00000492407 DCXO43602 365 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 KLRC1P26715 233 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 GNA11P29992 359 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 HOXD11P31277 338 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-212ENST00000492407 DEKP35659 375 aaKnown RBP10.38□□□□□ -0.75
HDAC3-212ENST00000492407 SARSP49591 514 aaKnown RBP10.38□□□□□ -0.75
HDAC3-212ENST00000492407 ZP2Q05996 745 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 HYAL1Q12794 435 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 ADAM15Q13444 863 aa10.38□□□□□ -0.75
HDAC3-212ENST00000492407 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-212ENST00000492407 PFKFB3Q16875 520 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-212ENST00000492407 PDE12Q6L8Q7 609 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms