RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 ZMYND12Q9H0C1 365 aa7□□□□□ -1.29
CCDC6-202ENST00000491922 AZI2Q9H6S1 392 aa7□□□□□ -1.29
CCDC6-202ENST00000491922 TXLNGQ9NUQ3 528 aa7□□□□□ -1.29
CCDC6-202ENST00000491922 CYP39A1Q9NYL5 469 aa7□□□□□ -1.29
CCDC6-202ENST00000491922 CNOT7Q9UIV1 285 aaKnown RBP7□□□□□ -1.29
CCDC6-202ENST00000491922 AMOTL2Q9Y2J4 779 aa7□□□□□ -1.29
CCDC6-202ENST00000491922 CD2APQ9Y5K6 639 aa7□□□□□ -1.29
CCDC6-202ENST00000491922 V9GY48 417 aaPredicted RBP7□□□□□ -1.29
CCDC6-202ENST00000491922 TTI1O43156 1089 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CREB3O43889 395 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PCCAP05165 728 aaPredicted RBP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PDHA1P08559 390 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CALM1P0DP23 149 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CALM2P0DP24 149 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CALM3P0DP25 149 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PYGBP11216 843 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 GNAT2P19087 354 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 HOXA7P31268 230 aaPredicted RBP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TUBP50607 506 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PMS2P54278 862 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 SF3A3Q12874 501 aaKnown RBP eCLIP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CNGA2Q16280 664 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PPP2R5EQ16537 467 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 HHATQ5VTY9 493 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 NCAPG2Q86XI2 1143 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 ENDOVQ8N8Q3 282 aaKnown RBP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 MAIP1Q8WWC4 291 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 UPF1Q92900 1129 aaKnown RBP eCLIP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 EEF2KMTQ96G04 330 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 FGD4Q96M96 766 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 RPS6KC1Q96S38 1066 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 C7orf25Q9BPX7 421 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 AP1M1Q9BXS5 423 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PIDD1Q9HB75 910 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 LRRC4CQ9HCJ2 640 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CTTNBP2NLQ9P2B4 639 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 AMACRQ9UHK6 382 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 DLEC1Q9Y238 1755 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 DOCK2Q92608 1830 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TNRQ92752 1358 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 UNC5CO95185 931 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 SHBGP04278 402 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TPBGLP0DKB5 382 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TATP17735 454 aaPredicted RBP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PSMC4P43686 418 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 IFNAR2P48551 515 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 GNAQP50148 359 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 NLRP5P59047 1200 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 STK4Q13043 487 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 SEC23AQ15436 765 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 ARMC3Q5W041 872 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CATIPQ7Z7H3 387 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 AGGF1Q8N302 714 aaeCLIP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 MIPOL1Q8TD10 442 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 ASAP3Q8TDY4 903 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 PIGOQ8TEQ8 1089 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 DYDC1Q8WWB3 177 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 DNAJC9Q8WXX5 260 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TBC1D5Q92609 795 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 IFT43Q96FT9 208 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TRIM9Q9C026 710 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 MTFR1LQ9H019 292 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 DPH5Q9H2P9 285 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 EPB41L4BQ9H329 900 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 NKX1-2Q9UD57 310 aaPredicted RBP6.99□□□□□ -1.29
CCDC6-202ENST00000491922 SCOCQ9UIL1 159 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 RIC1Q4ADV7 1423 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 RREB1Q92766 1687 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TNKSO95271 1327 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 C1orf167Q5SNV9 1468 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 CCDC88AQ3V6T2 1871 aa6.99□□□□□ -1.29
CCDC6-202ENST00000491922 TLDC2A0PJX2 215 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 EIF4E1BA6NMX2 242 aaKnown RBP6.98□□□□□ -1.29
CCDC6-202ENST00000491922 GSG1L2A8MUP6 293 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 MAP3K13O43283 966 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 PEX11AO75192 247 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 UPP2O95045 317 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 MBD4O95243 580 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 LMNAP02545 664 aaKnown RBP6.98□□□□□ -1.29
CCDC6-202ENST00000491922 POLE2P56282 527 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 ASIC1P78348 528 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 AMPD3Q01432 767 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 MKRN3Q13064 507 aaKnown RBP6.98□□□□□ -1.29
CCDC6-202ENST00000491922 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 OR52E8Q6IFG1 317 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 TSHZ1Q6ZSZ6 1077 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 FITM2Q8N6M3 262 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 ATP8B4Q8TF62 1192 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 ESR2Q92731 530 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.98□□□□□ -1.29
CCDC6-202ENST00000491922 FAM192AQ9GZU8 254 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 LRMDAQ9H2I8 198 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 SEMA6BQ9H3T3 888 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 ETNK1Q9HBU6 452 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 DMAP1Q9NPF5 467 aaPredicted RBP6.98□□□□□ -1.29
CCDC6-202ENST00000491922 PCMTD2Q9NV79 361 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 DLGAP2Q9P1A6 1054 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 PRKAG3Q9UGI9 489 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 GGT7Q9UJ14 662 aa6.98□□□□□ -1.29
CCDC6-202ENST00000491922 PNMA3Q9UL41 463 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms