RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SH2D3AQ9BRG2 576 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 SLC26A6Q9BXS9 759 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 TMX1Q9H3N1 280 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 SMARCAD1Q9H4L7 1026 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 GINS2Q9Y248 185 aa10.16□□□□□ -0.78
HDAC3-211ENST00000491581 FNDC1Q4ZHG4 1894 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-211ENST00000491581 H3BQ06 376 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-211ENST00000491581 GRM6O15303 877 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 IL9P15248 144 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 PDIA3P30101 505 aaKnown RBP10.15□□□□□ -0.78
HDAC3-211ENST00000491581 STAT5BP51692 787 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 MRPS6P82932 125 aaKnown RBP10.15□□□□□ -0.78
HDAC3-211ENST00000491581 GPM6BQ13491 265 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 UGCGQ16739 394 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 SWSAP1Q6NVH7 229 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 ABHD15Q6UXT9 468 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 SYMPKQ92797 1274 aaKnown RBP10.15□□□□□ -0.78
HDAC3-211ENST00000491581 LENG9Q96B70 501 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 SDF4Q9BRK5 362 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 EPHX3Q9H6B9 360 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 INSL6Q9Y581 213 aa10.15□□□□□ -0.78
HDAC3-211ENST00000491581 NFASCO94856 1347 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 IGKV6D-21A0A0A0MT36 114 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 FAM86C2PA6NEL3 165 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 BACH1O14867 736 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 LINC01565O15544 149 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 PRPF3O43395 683 aaKnown RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 ATG7O95352 703 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 PARNO95453 639 aaKnown RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 VTNP04004 478 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 GNAT1P11488 350 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 KCNA5P22460 613 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 DNAJB1P25685 340 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 KLRC1P26715 233 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 DLX2Q07687 328 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 CLUL1Q15846 466 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 PRR16Q569H4 304 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 TCEAL5Q5H9L2 206 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 MTHFD1LQ6UB35 978 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 EP400NLQ6ZTU2 488 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 TMEM192Q8IY95 271 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 GIMAP8Q8ND71 665 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 HLA-CQ95604 372 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 CDHR1Q96JP9 859 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 ZMYND12Q9H0C1 365 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 RC3H2Q9HBD1 1191 aaKnown RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 ALG13Q9NP73 1137 aaKnown RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 PADI3Q9ULW8 664 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 NOC2LQ9Y3T9 749 aaKnown RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 MRPL42Q9Y6G3 142 aaKnown RBP10.14□□□□□ -0.79
HDAC3-211ENST00000491581 TTC3P53804 2025 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 NID2Q14112 1375 aa10.14□□□□□ -0.79
HDAC3-211ENST00000491581 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
HDAC3-211ENST00000491581 CHMP2AO43633 222 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 ZNF862O60290 1169 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
HDAC3-211ENST00000491581 TDP2O95551 362 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 FGFR4P22455 802 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 CTNNB1P35222 781 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 CLCN3P51790 818 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 RBM10P98175 930 aaKnown RBP10.13□□□□□ -0.79
HDAC3-211ENST00000491581 CAMK1Q14012 370 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 KRT32Q14532 448 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 NPY5RQ15761 445 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 KIZQ2M2Z5 673 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 PDXDC2PQ6P474 469 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 TSHZ1Q6ZSZ6 1077 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 LRRC71Q8N4P6 559 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 ZNF577Q9BSK1 485 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 AGXT2Q9BYV1 514 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 AZI2Q9H6S1 392 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 UBE2ZQ9H832 354 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-211ENST00000491581 ZNF302Q9NR11 478 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 KCNJ14Q9UNX9 436 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 TRPV2Q9Y5S1 764 aa10.13□□□□□ -0.79
HDAC3-211ENST00000491581 ADGRA3Q8IWK6 1321 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 H3BNC9 293 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 MSH4O15457 936 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 EFCAB14O75071 495 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 CAND2O75155 1236 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 DGKIO75912 1065 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 LARGE1O95461 756 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 IRS1P35568 1242 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 FOSBP53539 338 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 NFX1Q12986 1120 aaKnown RBP10.12□□□□□ -0.79
HDAC3-211ENST00000491581 AP3B2Q13367 1082 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 DRP2Q13474 957 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 FAM102BQ5T8I3 360 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 TAF2Q6P1X5 1199 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 RUFY3Q7L099 469 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 ADGRD2Q7Z7M1 963 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 RPAINQ86UA6 219 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 KIAA0319LQ8IZA0 1049 aa10.12□□□□□ -0.79
HDAC3-211ENST00000491581 REXO1Q8N1G1 1221 aaKnown RBP10.12□□□□□ -0.79
HDAC3-211ENST00000491581 CRIPAKQ8N1N5 446 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms