RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MYLIPQ8WY64 445 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 FOXJ1Q92949 421 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 HIPK3Q9H422 1215 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 RIOX1Q9H6W3 641 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 IL23AQ9NPF7 189 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 LMBRD1Q9NUN5 540 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 TRMT13Q9NUP7 481 aaKnown RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 VPS54Q9P1Q0 977 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 COL20A1Q9P218 1284 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 TFIP11Q9UBB9 837 aaKnown RBP8.62□□□□□ -1.03
CLDN1-202ENST00000490800 KCNJ14Q9UNX9 436 aa8.62□□□□□ -1.03
CLDN1-202ENST00000490800 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 GOLGA6L22H0YM25 854 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 NKRFO15226 690 aaKnown RBP eCLIP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 CFBP00751 764 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 FGBP02675 491 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 MMP1P03956 469 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 CYP2C9P11712 490 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 TTLL4Q14679 1199 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 GRIN2CQ14957 1233 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 LY6KQ17RY6 165 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 BRDTQ58F21 947 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 RASIP1Q5U651 963 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 SEPT14Q6ZU15 432 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 BPHLQ86WA6 291 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 TMEM87AQ8NBN3 555 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 NSUN6Q8TEA1 469 aaKnown RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 SCLYQ96I15 445 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 MTG1Q9BT17 334 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 PHF20Q9BVI0 1012 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 NOC4LQ9BVI4 516 aaKnown RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 AMNQ9BXJ7 453 aa8.61□□□□□ -1.03
CLDN1-202ENST00000490800 CXXC1Q9P0U4 656 aaPredicted RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 MRPL11Q9Y3B7 192 aaKnown RBP8.61□□□□□ -1.03
CLDN1-202ENST00000490800 STXBP3O00186 592 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 PRPF40AO75400 957 aaKnown RBP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 XBP1P17861 261 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 NCLP19338 710 aaKnown RBP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 EIF2AK2P19525 551 aaKnown RBP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 PTMSP20962 102 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 CHMP4BP1P59074 171 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 KRT85P78386 507 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 SAFBQ15424 915 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 NPY5RQ15761 445 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 STXBP2Q15833 593 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 FAM47CQ5HY64 1035 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 ARHGEF16Q5VV41 709 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 WWC2Q6AWC2 1192 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 CCDC62Q6P9F0 684 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 PSRC1Q6PGN9 363 aaPredicted RBP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 OTOP2Q7RTS6 562 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 BRAPQ7Z569 592 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 DIS3L2Q8IYB7 885 aaKnown RBP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 HERVK_113Q902F9 699 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 MTMR8Q96EF0 704 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 RRP36Q96EU6 259 aaKnown RBP8.6□□□□□ -1.03
CLDN1-202ENST00000490800 PIGSQ96S52 555 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 IWS1Q96ST2 819 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 PBX4Q9BYU1 374 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 MAF1Q9H063 256 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 WNT8AQ9H1J5 351 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 SH3GLB2Q9NR46 395 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 MYH15Q9Y2K3 1946 aa8.6□□□□□ -1.03
CLDN1-202ENST00000490800 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 BTBD18B2RXH4 712 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 OPLAHO14841 1288 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 ZBTB5O15062 677 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 FIBPO43427 364 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 KPNA6O60684 536 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 PPP1R11O60927 126 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 EIF3JO75822 258 aaKnown RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 NR3C2P08235 984 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 SUPT20HL2P0C7V6 817 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 MYCLP12524 364 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 FOSL2P15408 326 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 SH3BP2P78314 561 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 NR5A1Q13285 461 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 ATL3Q6DD88 541 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 HEATR3Q7Z4Q2 680 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 HOMER1Q86YM7 354 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 RPUSD2Q8IZ73 545 aaKnown RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 FAM177A1Q8N128 213 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 MAFAQ8NHW3 353 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 AFG1LQ8WV93 481 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 ZNF592Q92610 1267 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 PBXIP1Q96AQ6 731 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 TIFAQ96CG3 184 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 VWCEQ96DN2 955 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 ZNF396Q96N95 335 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 FOXP1Q9H334 677 aaPredicted RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
CLDN1-202ENST00000490800 BARHL2Q9NY43 387 aa8.59□□□□□ -1.03
CLDN1-202ENST00000490800 SEC63Q9UGP8 760 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms