RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 IRX5P78411 483 aaPredicted RBP22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 PRKCEQ02156 737 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 PPFIA1Q13136 1202 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 SNX17Q15036 470 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 NBPF20Q3BBV1 942 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 SLC39A5Q6ZMH5 540 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 TRIM50Q86XT4 487 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 TPH2Q8IWU9 490 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 LEO1Q8WVC0 666 aaPredicted RBP22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 DYDC2Q96IM9 177 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 TOX2Q96NM4 488 aa22.22■■□□□ 1.15
SHROOM3-209ENST00000490690 C17orf102A2RUQ5 167 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 SLITRK3O94933 977 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 PLCB4Q15147 1175 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 FAM47CQ5HY64 1035 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 BANK1Q8NDB2 785 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 DIS3LQ8TF46 1054 aaKnown RBP22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 CCSER1Q9C0I3 900 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 ANKEF1Q9NU02 776 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 FAM13BQ9NYF5 915 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 GTF2IRD1Q9UHL9 959 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 NOD1Q9Y239 953 aa22.21■■□□□ 1.15
SHROOM3-209ENST00000490690 GOLGA6L4A6NEF3 574 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 DCDC2CA8MYV0 355 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 SMIM10L2AP0DMW4 78 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 SMIM10L2BP0DMW5 78 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 MARK3P27448 753 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 YWHABP31946 246 aaKnown RBP22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 CHMP4BP1P59074 171 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 CYP4A11Q02928 519 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 IL17AQ16552 155 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 HYIQ5T013 277 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 ANKRD33Q7Z3H0 272 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 CABP7Q86V35 215 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 CATSPER3Q86XQ3 398 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 NIFKQ9BYG3 293 aaKnown RBP22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 CSRNP2Q9H175 543 aa22.2■■□□□ 1.14
SHROOM3-209ENST00000490690 MAGEB2O15479 319 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 CDK7P50613 346 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 PSMC6P62333 389 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 ADALQ6DHV7 355 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 ZNF710Q8N1W2 664 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 CCDC155Q8N6L0 562 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 GBP4Q96PP9 640 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 RGL1Q9NZL6 768 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 SEPT9Q9UHD8 586 aaPredicted RBP22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 DNM3Q9UQ16 869 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 TELO2Q9Y4R8 837 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 MYH15Q9Y2K3 1946 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 SCN10AQ9Y5Y9 1956 aa22.19■■□□□ 1.14
SHROOM3-209ENST00000490690 GAS2O43903 313 aaKnown RBP22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 CTTNQ14247 550 aaKnown RBP22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 GRIK4Q16099 956 aa22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 TAF2Q6P1X5 1199 aa22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 CCDC73Q6ZRK6 1079 aa22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 RETREG2Q8NC44 543 aa22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 RNPEPQ9H4A4 650 aa22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 HDAC6Q9UBN7 1215 aa22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 DBR1Q9UK59 544 aaKnown RBP22.18■■□□□ 1.14
SHROOM3-209ENST00000490690 DDX11L8A8MPP1 907 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 ZNF862O60290 1169 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 SPATA31C1P0DKV0 1188 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 INSRRP14616 1297 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 HOXC8P31273 242 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 RFC5P40937 340 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 ATN1P54259 1190 aaPredicted RBP22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 UGCGQ16739 394 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 SYMPKQ92797 1274 aaKnown RBP22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 PCDHA7Q9UN72 937 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 DOCK5Q9H7D0 1870 aa22.17■■□□□ 1.14
SHROOM3-209ENST00000490690 GOLGA6L22H0YM25 854 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 CAND2O75155 1236 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 MED24O75448 989 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 TMOD1P28289 359 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 RTP1P59025 263 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 PTGISQ16647 500 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 CLEC17AQ6ZS10 378 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 RSPH3Q86UC2 560 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 SLC7A3Q8WY07 619 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 CCDC34Q96HJ3 373 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 CEP170P1Q96L14 293 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 CYP26B1Q9NR63 512 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 STK17AQ9UEE5 414 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 TUBE1Q9UJT0 475 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 KIAA1024Q9UPX6 916 aa22.16■■□□□ 1.14
SHROOM3-209ENST00000490690 GRIN2DO15399 1336 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 A0A1W2PQ27 194 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 A0A1W2PQ64 194 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 A0A1W2PQD8 194 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 ATP4AP20648 1035 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 CDC42EP1Q00587 391 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 TBC1D8BQ0IIM8 1120 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 FAM126BQ8IXS8 530 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 LMBR1Q8WVP7 490 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 CLIC6Q96NY7 704 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 CUEDC2Q9H467 287 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 DDX19AQ9NUU7 478 aaKnown RBP22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 KCND2Q9NZV8 630 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 PRKAG2Q9UGJ0 569 aa22.15■■□□□ 1.14
SHROOM3-209ENST00000490690 MBLAC1A4D2B0 266 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms