RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 CHMP2AO43633 222 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 ZNF862O60290 1169 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 SORBS3O60504 671 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 CMA1P23946 247 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 UBA7P41226 1012 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 ADAM17P78536 824 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 GRIN1Q05586 938 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 MFSD10Q14728 455 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 PLCB4Q15147 1175 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 KIAA0753Q2KHM9 967 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 FOXD4L6Q3SYB3 417 aaPredicted RBP13.98□□□□□ -0.17
HDAC1-210ENST00000490081 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 UTP14CQ5TAP6 766 aaKnown RBP13.98□□□□□ -0.17
HDAC1-210ENST00000490081 PDXDC2PQ6P474 469 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 FOXD4L3Q6VB84 417 aaPredicted RBP13.98□□□□□ -0.17
HDAC1-210ENST00000490081 DYDC2Q96IM9 177 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 TOX2Q96NM4 488 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 NACC1Q96RE7 527 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 CSRNP2Q9H175 543 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 RNPEPQ9H4A4 650 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 C11orf49Q9H6J7 331 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 ANKEF1Q9NU02 776 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 DBR1Q9UK59 544 aaKnown RBP13.98□□□□□ -0.17
HDAC1-210ENST00000490081 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 A0A0U1RQG5 324 aaPredicted RBP13.97□□□□□ -0.17
HDAC1-210ENST00000490081 POTEB3A0JP26 581 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 ARVCFO00192 962 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 MED24O75448 989 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 GNAT1P11488 350 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 ME1P48163 572 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 ITGA7Q13683 1181 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 TARBP2Q15633 366 aaKnown RBP13.97□□□□□ -0.17
HDAC1-210ENST00000490081 UGCGQ16739 394 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 NBPF20Q3BBV1 942 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 POTEBQ6S5H4 581 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 SLC39A5Q6ZMH5 540 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 OTUD6AQ7L8S5 288 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 ANKRD33Q7Z3H0 272 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 EXOC8Q8IYI6 725 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 PAWRQ96IZ0 340 aaKnown RBP13.97□□□□□ -0.17
HDAC1-210ENST00000490081 LXNQ9BS40 222 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 STARD7Q9NQZ5 370 aa13.97□□□□□ -0.17
HDAC1-210ENST00000490081 MROH7Q68CQ1 1323 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 OATP04181 439 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 RPLP2P05387 115 aaKnown RBP13.96□□□□□ -0.17
HDAC1-210ENST00000490081 ZNF286BP0CG31 522 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.17
HDAC1-210ENST00000490081 CCT6AP40227 531 aaKnown RBP13.96□□□□□ -0.17
HDAC1-210ENST00000490081 TMEM119Q4V9L6 283 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 RESP18Q5W5W9 173 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 SHC4Q6S5L8 630 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 ANO5Q75V66 913 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 CABP7Q86V35 215 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 TPH2Q8IWU9 490 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 BANK1Q8NDB2 785 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 SNX29Q8TEQ0 813 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 CLIC6Q96NY7 704 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 PYM1Q9BRP8 204 aaKnown RBP13.96□□□□□ -0.17
HDAC1-210ENST00000490081 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-210ENST00000490081 WRAP73Q9P2S5 460 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-210ENST00000490081 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.17
HDAC1-210ENST00000490081 TRIP12Q14669 1992 aaPredicted RBP13.95□□□□□ -0.18
HDAC1-210ENST00000490081 MBLAC1A4D2B0 266 aaPredicted RBP13.95□□□□□ -0.18
HDAC1-210ENST00000490081 PP2D1A8MPX8 630 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 MAGEB2O15479 319 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 SMIM10L2AP0DMW4 78 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 SMIM10L2BP0DMW5 78 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 INSRRP14616 1297 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 YWHABP31946 246 aaKnown RBP13.95□□□□□ -0.18
HDAC1-210ENST00000490081 TXLNAP40222 546 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 PRKCEQ02156 737 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 GRB10Q13322 594 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 CTTNQ14247 550 aaKnown RBP13.95□□□□□ -0.18
HDAC1-210ENST00000490081 RPAINQ86UA6 219 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 C7orf31Q8N865 590 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 SYMPKQ92797 1274 aaKnown RBP13.95□□□□□ -0.18
HDAC1-210ENST00000490081 CALML4Q96GE6 196 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 EPSTI1Q96J88 318 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 CHAMP1Q96JM3 812 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 PNMA5Q96PV4 448 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 CCDC39Q9UFE4 941 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 DNM3Q9UQ16 869 aa13.95□□□□□ -0.18
HDAC1-210ENST00000490081 ZBTB42B2RXF5 422 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 CD4P01730 458 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-210ENST00000490081 CDC25AP30304 524 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 CYP4A11Q02928 519 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 ECM1Q16610 540 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 CCDC73Q6ZRK6 1079 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 USP49Q70CQ1 688 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 CKAP2LQ8IYA6 745 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 ZNF710Q8N1W2 664 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 DIS3LQ8TF46 1054 aaKnown RBP13.94□□□□□ -0.18
HDAC1-210ENST00000490081 VTI1AQ96AJ9 217 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
HDAC1-210ENST00000490081 JPH2Q9BR39 696 aaPredicted RBP13.94□□□□□ -0.18
HDAC1-210ENST00000490081 CUEDC2Q9H467 287 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms