RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DNAJC17Q9NVM6 304 aaKnown RBP9.51□□□□□ -0.89
LSAMP-205ENST00000490035 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.51□□□□□ -0.89
LSAMP-205ENST00000490035 PLA2G4BP0C869 781 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 TRIM68Q6AZZ1 485 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 PDCD7Q8N8D1 485 aaKnown RBP9.51□□□□□ -0.89
LSAMP-205ENST00000490035 FBXL13Q8NEE6 735 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 TBCKQ8TEA7 893 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 FAM129AQ9BZQ8 928 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 GSTA4O15217 222 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ATP6V1E1P36543 226 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 KCNJ6P48051 423 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ZKSCAN8Q15776 578 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 KRT80Q6KB66 452 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 NCAPG2Q86XI2 1143 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 THEM5Q8N1Q8 247 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 SUGCTQ9HAC7 445 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 PTPN22Q9Y2R2 807 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 K7ERI5 159 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ASAP2O43150 1006 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 SERPINB2P05120 415 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 TOGARAM2Q6ZUX3 1019 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 DDX56Q9NY93 547 aaKnown RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 DBNLQ9UJU6 430 aaKnown RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 CFAP73A6NFT4 308 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 GFPT2O94808 682 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 KRT1P04264 644 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 TRADDQ15628 312 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 TBC1D9BQ66K14 1250 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 STAMQ92783 540 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 CEP170P1Q96L14 293 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 TOPORSQ9NS56 1045 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 BSDC1Q9NW68 430 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 SUN2Q9UH99 717 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 PMLP29590 882 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 MAP3K10Q02779 954 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ZC3H13Q5T200 1668 aaKnown RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ESRRAP11474 423 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 FAM98CQ17RN3 349 aaKnown RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 KCNV1Q6PIU1 500 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 SIX6OS1Q8N1H7 587 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 GOLGA8TH3BQL2 631 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 GOLGA8HP0CJ92 632 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 GYG1P46976 350 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 PDE1CQ14123 709 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 TRPC5Q9UL62 973 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ATP8A1Q9Y2Q0 1164 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 TARSL2A2RTX5 802 aaKnown RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ARL4CP56559 192 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 LONRF3Q496Y0 759 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 ASNSD1Q9NWL6 643 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 RRP15Q9Y3B9 282 aaKnown RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 PVALEFA0A1B0GWK0 134 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 MDM2Q00987 491 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 SKA2Q8WVK7 121 aaPredicted RBP9.5□□□□□ -0.89
LSAMP-205ENST00000490035 WNT8AQ9H1J5 351 aa9.5□□□□□ -0.89
LSAMP-205ENST00000490035 NPR1P16066 1061 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 IREB2P48200 963 aaKnown RBP9.49□□□□□ -0.89
LSAMP-205ENST00000490035 ACAD11Q709F0 780 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 ORAI2Q96SN7 254 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 TRIM55Q9BYV6 548 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 ZBED1O96006 694 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 FAM47CQ5HY64 1035 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 ARHGAP18Q8N392 663 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 FOXP3Q9BZS1 431 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 YY1AP1Q9H869 796 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 TEKT2Q9UIF3 430 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 INO80B-WBP1J3KQ70 363 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 RNF207Q6ZRF8 634 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 ARHGEF40Q8TER5 1519 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 EFCAB14O75071 495 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 APBA3O96018 575 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 POLR3CQ9BUI4 534 aaPredicted RBP9.49□□□□□ -0.89
LSAMP-205ENST00000490035 GREM2Q9H772 168 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 STOML1Q9UBI4 398 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 CYP21A2P08686 494 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 DHX9Q08211 1270 aaKnown RBP9.49□□□□□ -0.89
LSAMP-205ENST00000490035 UBE2TQ9NPD8 197 aaPredicted RBP9.49□□□□□ -0.89
LSAMP-205ENST00000490035 FAM187AA6NFU0 413 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 GRM1Q13255 1194 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 MAPRE2Q15555 327 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 GPKOWQ92917 476 aaPredicted RBP eCLIP9.49□□□□□ -0.89
LSAMP-205ENST00000490035 USP17L3A6NCW0 530 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 USP17L4A6NCW7 530 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 USP17L1Q7RTZ2 530 aa9.49□□□□□ -0.89
LSAMP-205ENST00000490035 SERPINB4P48594 390 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 NAALADL2Q58DX5 795 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 TMTC4Q5T4D3 741 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 ZNF772Q68DY9 489 aaPredicted RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 MB21D1Q8N884 522 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 NOP53Q9NZM5 478 aaKnown RBP9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PSMD3O43242 534 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PLCG1P19174 1290 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 DDIT3P35638 169 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 VPS41P49754 854 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 PLTPP55058 493 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 GPC5P78333 572 aa9.48□□□□□ -0.89
LSAMP-205ENST00000490035 SNX1Q13596 522 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms