RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ST6GALNAC2Q9UJ37 374 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 PTCH2Q9Y6C5 1203 aa5.86□□□□□ -1.47
HMGN1-218ENST00000490032 TCRBV16S1A1N1A0A5B0 115 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 PATE3B3GLJ2 98 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 KCNK3O14649 394 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 NPTXRO95502 500 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 MPIG6BO95866 241 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 APPP05067 770 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 USP10Q14694 798 aaKnown RBP5.85□□□□□ -1.47
HMGN1-218ENST00000490032 STILQ15468 1287 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 CXXC5Q7LFL8 322 aaKnown RBP5.85□□□□□ -1.47
HMGN1-218ENST00000490032 OVCH1Q7RTY7 1134 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 GPR155Q7Z3F1 870 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 BRAPQ7Z569 592 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 CISD2Q8N5K1 135 aaKnown RBP5.85□□□□□ -1.47
HMGN1-218ENST00000490032 SREK1Q8WXA9 508 aaKnown RBP5.85□□□□□ -1.47
HMGN1-218ENST00000490032 NCOA5Q9HCD5 579 aaKnown RBP5.85□□□□□ -1.47
HMGN1-218ENST00000490032 TRIM39Q9HCM9 518 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 JADE2Q9NQC1 790 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 COQ6Q9Y2Z9 468 aa5.85□□□□□ -1.47
HMGN1-218ENST00000490032 PRAMEF25A6NGN4 478 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 ETV4P43268 484 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 IL13RA1P78552 427 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 TM4SF20Q53R12 229 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 FGD2Q7Z6J4 655 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 DLG3Q92796 817 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 WNK4Q96J92 1243 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 DNAJC2Q99543 621 aaKnown RBP5.84□□□□□ -1.47
HMGN1-218ENST00000490032 CARD11Q9BXL7 1154 aa5.84□□□□□ -1.47
HMGN1-218ENST00000490032 ESYT3A0FGR9 886 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 PLD2O14939 933 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 ZNF888P0CJ79 500 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-218ENST00000490032 TNFRSF1AP19438 455 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 MC4RP32245 332 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 PUM1Q14671 1186 aaKnown RBP eCLIP5.83□□□□□ -1.483e-25■□□□□ 8.5
HMGN1-218ENST00000490032 CDSNQ15517 529 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 FSTL4Q6MZW2 842 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 ABHD17CQ6PCB6 329 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 IFNL2Q8IZJ0 200 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 WWC2-AS2Q96NR7 200 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 BTBD2Q9BX70 525 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 AMNQ9BXJ7 453 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 ZDHHC5Q9C0B5 715 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 KCNH7Q9NS40 1196 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 FBXO10Q9UK96 956 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 CDK11AQ9UQ88 783 aaPredicted RBP5.83□□□□□ -1.48
HMGN1-218ENST00000490032 PTPN22Q9Y2R2 807 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 TSC22D4Q9Y3Q8 395 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 B3GALT1Q9Y5Z6 326 aa5.83□□□□□ -1.48
HMGN1-218ENST00000490032 SCDO00767 359 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 MATN3O15232 486 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 MMEP08473 750 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 SDHAP31040 664 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 NFE2L2Q16236 605 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 WDR72Q3MJ13 1102 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 KANK2Q63ZY3 851 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 OTOP1Q7RTM1 612 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 ASB15Q8WXK1 588 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 SCYL1Q96KG9 808 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 LMF1Q96S06 567 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 KLC2Q9H0B6 622 aa5.82□□□□□ -1.48
HMGN1-218ENST00000490032 SLC12A8A0AV02 714 aa5.81□□□□□ -1.48
HMGN1-218ENST00000490032 RASSF10A6NK89 507 aa5.81□□□□□ -1.48
HMGN1-218ENST00000490032 ZNF623O75123 536 aa5.81□□□□□ -1.48
HMGN1-218ENST00000490032 ECE1P42892 770 aa5.81□□□□□ -1.48
HMGN1-218ENST00000490032 R3HDM1Q15032 1099 aaKnown RBP5.81□□□□□ -1.48
HMGN1-218ENST00000490032 EIF4HQ15056 248 aaKnown RBP5.81□□□□□ -1.48
HMGN1-218ENST00000490032 TMEM177Q53S58 311 aa5.81□□□□□ -1.48
HMGN1-218ENST00000490032 ZMAT1Q5H9K5 638 aa5.81□□□□□ -1.48
HMGN1-218ENST00000490032 NEIL1Q96FI4 390 aaPredicted RBP5.81□□□□□ -1.48
HMGN1-218ENST00000490032 CDK5RAP1Q96SZ6 601 aaKnown RBP5.81□□□□□ -1.48
HMGN1-218ENST00000490032 ASB1Q9Y576 335 aa5.81□□□□□ -1.48
HMGN1-218ENST00000490032 FOXP2O15409 715 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 MAFO75444 373 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-218ENST00000490032 ZBTB48P10074 688 aaPredicted RBP5.8□□□□□ -1.48
HMGN1-218ENST00000490032 SELENOPP49908 381 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 MECP2P51608 486 aaKnown RBP5.8□□□□□ -1.48
HMGN1-218ENST00000490032 ZNF568Q3ZCX4 644 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 FNDC3BQ53EP0 1204 aaKnown RBP5.8□□□□□ -1.48
HMGN1-218ENST00000490032 TMEM200BQ69YZ2 307 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 TCTN3Q6NUS6 607 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 LRSAM1Q6UWE0 723 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 IGSF22Q8N9C0 903 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 Q8TCH9 128 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 GNRHR2Q96P88 292 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 GBP4Q96PP9 640 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 OR10A5Q9H207 317 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 UCKL1Q9NWZ5 548 aa5.8□□□□□ -1.48
HMGN1-218ENST00000490032 GOLGA6L22H0YM25 854 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 FOXS1O43638 330 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 RAPGEF3O95398 923 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 RAC3P60763 192 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 SQSTM1Q13501 440 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 NFYCQ13952 458 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 BMS1Q14692 1282 aaKnown RBP5.79□□□□□ -1.48
HMGN1-218ENST00000490032 RNF151Q2KHN1 245 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 CATSPEREQ5SY80 951 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 TRIM68Q6AZZ1 485 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 C2orf69Q8N8R5 385 aa5.79□□□□□ -1.48
HMGN1-218ENST00000490032 CLUHP3Q96NS8 147 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms