RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 RGL3Q3MIN7 710 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 CATSPEREQ5SY80 951 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 FSTL4Q6MZW2 842 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 CNKSR3Q6P9H4 555 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 DPP8Q6V1X1 898 aaPredicted RBP7.83□□□□□ -1.16
VPS26A-206ENST00000489794 NECAB2Q7Z6G3 386 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 PROSER1Q86XN7 944 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 FAM129CQ86XR2 697 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 TMEM151BQ8IW70 566 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 TMEFF1Q8IYR6 380 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 DTX3Q8N9I9 347 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 HIPK4Q8NE63 616 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 CALML6Q8TD86 181 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 ASB15Q8WXK1 588 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 GBP4Q96PP9 640 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 GORASP1Q9BQQ3 440 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 SPTLC3Q9NUV7 552 aa7.83□□□□□ -1.16
VPS26A-206ENST00000489794 USP36Q9P275 1121 aaKnown RBP7.83□□□□□ -1.16
VPS26A-206ENST00000489794 SMG5Q9UPR3 1016 aaKnown RBP7.83□□□□□ -1.16
VPS26A-206ENST00000489794 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.82□□□□□ -1.16
VPS26A-206ENST00000489794 DVL2O14641 736 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 GPR39O43194 453 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 MMEP08473 750 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 SLC9A1P19634 815 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 POU3F3P20264 500 aaPredicted RBP7.82□□□□□ -1.16
VPS26A-206ENST00000489794 SESN3P58005 492 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 HTRA3P83110 453 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 PFKPQ01813 784 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 STAT4Q14765 748 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 KCNA10Q16322 511 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 ZNF648Q5T619 568 aaPredicted RBP7.82□□□□□ -1.16
VPS26A-206ENST00000489794 DDX42Q86XP3 938 aaKnown RBP eCLIP7.82□□□□□ -1.16
VPS26A-206ENST00000489794 SPATS2Q86XZ4 545 aaKnown RBP7.82□□□□□ -1.16
VPS26A-206ENST00000489794 C16orf92Q96LL3 132 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 INCENPQ9NQS7 918 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 BTBD7Q9P203 1132 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 KCTD3Q9Y597 815 aa7.82□□□□□ -1.16
VPS26A-206ENST00000489794 GOLGA6L22H0YM25 854 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 KRT1P04264 644 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 C1QTNF9P0C862 333 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 LIMS1P48059 325 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 SMAD3P84022 425 aaKnown RBP7.81□□□□□ -1.16
VPS26A-206ENST00000489794 SMAD2Q15796 467 aaKnown RBP7.81□□□□□ -1.16
VPS26A-206ENST00000489794 DDB1Q16531 1140 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 SKIDA1Q1XH10 827 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 TMC5Q6UXY8 1006 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 TTLL7Q6ZT98 887 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 ZNF610Q8N9Z0 462 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 WDR48Q8TAF3 677 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 SLC5A5Q92911 643 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 ZBTB8AQ96BR9 441 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 FOXB1Q99853 325 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 GALNT8Q9NY28 637 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 ARHGAP20Q9P2F6 1191 aa7.81□□□□□ -1.16
VPS26A-206ENST00000489794 RAB11FIP3O75154 756 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 FBXO21O94952 628 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 CDK11BP21127 795 aaKnown RBP7.8□□□□□ -1.16
VPS26A-206ENST00000489794 JAG1P78504 1218 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 ADAM9Q13443 819 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 TERF2Q15554 542 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 LIPIQ6XZB0 460 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 PHYKPLQ8IUZ5 450 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 GPATCH3Q96I76 525 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 PWWP2AQ96N64 755 aa7.8□□□□□ -1.16
VPS26A-206ENST00000489794 H2AFY2Q9P0M6 372 aaPredicted RBP7.8□□□□□ -1.16
VPS26A-206ENST00000489794 UBA6A0AVT1 1052 aaPredicted RBP7.79□□□□□ -1.16
VPS26A-206ENST00000489794 RASSF10A6NK89 507 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 MAFGO15525 162 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 TGM5O43548 720 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 PI3P19957 117 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 LINC00310P59036 64 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 ROM1Q03395 351 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 SSPNQ14714 243 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 TTC38Q5R3I4 469 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 TIGD7Q6NT04 549 aaPredicted RBP7.79□□□□□ -1.16
VPS26A-206ENST00000489794 CXXC5Q7LFL8 322 aaKnown RBP7.79□□□□□ -1.16
VPS26A-206ENST00000489794 RTN4RL1Q86UN2 441 aaPredicted RBP7.79□□□□□ -1.16
VPS26A-206ENST00000489794 ANKRD13AQ8IZ07 590 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 C7orf31Q8N865 590 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 FNIP1Q8TF40 1166 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 BTBD2Q9BX70 525 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 SLC39A2Q9NP94 309 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 PHLDB1Q86UU1 1377 aa7.79□□□□□ -1.16
VPS26A-206ENST00000489794 PTX3P26022 381 aaPredicted RBP7.78□□□□□ -1.16
VPS26A-206ENST00000489794 THBS2P35442 1172 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 TMPRSS15P98073 1019 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 ALDH6A1Q02252 535 aaKnown RBP7.78□□□□□ -1.16
VPS26A-206ENST00000489794 BROXQ5VW32 411 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 IQSEC1Q6DN90 963 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 FRMD7Q6ZUT3 714 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 SAPCD2Q86UD0 394 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 RASSF3Q86WH2 238 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 CILP2Q8IUL8 1156 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 NOX5Q96PH1 765 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 PUS7LQ9H0K6 701 aaKnown RBP7.78□□□□□ -1.16
VPS26A-206ENST00000489794 ZMAT4Q9H898 229 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 NTMQ9P121 344 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 KCNG1Q9UIX4 513 aa7.78□□□□□ -1.16
VPS26A-206ENST00000489794 PRAMEF22A3QJZ6 481 aa7.77□□□□□ -1.17
VPS26A-206ENST00000489794 MAFO75444 373 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms