RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TRIM47Q96LD4 638 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 CEP63Q96MT8 703 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 TEPSINQ96N21 525 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 PANX2Q96RD6 677 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 NACC1Q96RE7 527 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 TEKT3Q9BXF9 490 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 CPVLQ9H3G5 476 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 R3HDMLQ9H3Y0 253 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 SLC38A10Q9HBR0 1119 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 GBA2Q9HCG7 927 aaPredicted RBP7.07□□□□□ -1.28
SF3A3-208ENST00000489537 ATP13A2Q9NQ11 1180 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 EVA1BQ9NVM1 165 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 TMEM260Q9NX78 707 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 DAAM1Q9Y4D1 1078 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 CSADQ9Y600 493 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 BRCA2P51587 3418 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 MYH4Q9Y623 1939 aa7.07□□□□□ -1.28
SF3A3-208ENST00000489537 TNRC18O15417 2968 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 A0A087X0B3 334 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 LOC102724159A0A0B4J2E5 919 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 AKR1B15C9JRZ8 316 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 MEIS1O00470 390 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 N4BP3O15049 544 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 SLC37A4O43826 429 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 GAS7O60861 476 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 TBCAO75347 108 aaKnown RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 FLOT1O75955 427 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 BMP6P22004 513 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 PTGS1P23219 599 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 MAP2K2P36507 400 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 ECE1P42892 770 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 JAK3P52333 1124 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 TUBB4BP68371 445 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 FKBP3Q00688 224 aaKnown RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 CAP1Q01518 475 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 NR1I3Q14994 352 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 PWP2Q15269 919 aaKnown RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 EDRF1Q3B7T1 1238 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 PRR16Q569H4 304 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 NOM1Q5C9Z4 860 aaKnown RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 SH3D19Q5HYK7 790 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 PCNX4Q63HM2 1172 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 KLHL10Q6JEL2 608 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 RGMBQ6NW40 437 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 MIGA2Q7L4E1 593 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 NLRX1Q86UT6 975 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 SPICE1Q8N0Z3 855 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 GOLGA5Q8TBA6 731 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 ETNPPLQ8TBG4 499 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 ACER1Q8TDN7 264 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 HAS1Q92839 578 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 ERCC4Q92889 916 aaPredicted RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 HPS1Q92902 700 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 P2RX5Q93086 422 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 IWS1Q96ST2 819 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 MMTAG2Q9BU76 263 aaKnown RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 EDEM3Q9BZQ6 932 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 TANGO6Q9C0B7 1094 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 UNC93B1Q9H1C4 597 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 CGNQ9P2M7 1197 aaKnown RBP7.06□□□□□ -1.28
SF3A3-208ENST00000489537 FAM184BQ9ULE4 1060 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 COL4A3BPQ9Y5P4 624 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 SSC5DA1L4H1 1573 aa7.06□□□□□ -1.28
SF3A3-208ENST00000489537 UBE4BO95155 1302 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 KCNJ18B7U540 433 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 CXCL11O14625 94 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 TRIM66O15016 1216 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 AP5Z1O43299 807 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 KLRC4O43908 158 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 IPO7O95373 1038 aaKnown RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 EYA4O95677 639 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PLA2G4BP0C869 781 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 IDEP14735 1019 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PTPRAP18433 802 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 VCAM1P19320 739 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PRCPP42785 496 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 SNRPFP62306 86 aaKnown RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 KRT76Q01546 638 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 MAP2K1Q02750 393 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PPATQ06203 517 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 KCNH2Q12809 1159 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 GRB10Q13322 594 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 TUBB2AQ13885 445 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 KCNJ12Q14500 433 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 EPHA7Q15375 998 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 GNPTABQ3T906 1256 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 TCP11X2Q5H9J9 407 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 FIGNQ5HY92 759 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 LRCH2Q5VUJ6 765 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 ISM2Q6H9L7 571 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 CENPPQ6IPU0 288 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PTCRAQ6ISU1 281 aaPredicted RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 TREML4Q6UXN2 200 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 MTERF4Q7Z6M4 381 aaKnown RBP7.05□□□□□ -1.28
SF3A3-208ENST00000489537 RASAL3Q86YV0 1011 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 TMTC1Q8IUR5 882 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 PARP9Q8IXQ6 854 aa7.05□□□□□ -1.28
SF3A3-208ENST00000489537 GRAMD1CQ8IYS0 662 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms